RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 J3QW42 95 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 MITFO75030 526 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 CIB2O75838 187 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 IFNGP01579 166 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 HLA-DQA2P01906 255 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 KITLGP21583 273 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 SLC2A5P22732 501 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 GATA3P23771 443 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 POU1F1P28069 291 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 EPHA2P29317 976 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 OTX1P32242 354 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 ENTPD1P49961 510 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 ACTR3P61158 418 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 LCN2P80188 198 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 GINS1Q14691 196 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 KPNB1Q14974 876 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 LINC01559Q495D7 138 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 KLF17Q5JT82 389 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 TEX30Q5JUR7 227 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 FAM209AQ5JX71 171 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 KDM4DQ6B0I6 523 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 Q6ZR03 302 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 TIGD4Q8IY51 512 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 C1orf174Q8IYL3 243 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 SIGLECL1Q8N7X8 197 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 BBS1Q8NFJ9 593 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 ST7LQ8TDW4 575 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 PYDC1Q8WXC3 89 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 DNAJC9Q8WXX5 260 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 PTP4A1Q93096 173 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZNF48Q96MX3 618 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 GAL3ST1Q99999 423 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 C7orf69Q9H7B7 122 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 PAPOLBQ9NRJ5 636 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 EIF3KQ9UBQ5 218 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 GPR160Q9UJ42 338 aa6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 PURGQ9UJV8 347 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-210ENST00000462553 PPIAL4EA0A075B759 164 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 PPIAL4CA0A0B4J2A2 164 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 CCDC182A6NF36 153 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZAR1LA6NP61 321 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 PPIAL4DF5H284 164 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 M0R129 80 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 SPRY3O43610 288 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 GLCEO94923 617 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 IGHV2-70P01814 119 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ADH4P08319 380 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 SPARCP09486 303 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 PPIAL4FP0DN26 164 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 FCGR1AP12314 374 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZNF823P16415 610 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 FASP25445 335 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 FMO3P31513 532 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 RGS6P49758 472 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZNF81P51508 661 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ARHGDIAP52565 204 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 CRISP1P54107 249 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 SELENOVP59797 346 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 SEC61A1P61619 476 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 CDK5R2Q13319 367 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 HFEQ30201 348 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 PDLIM3Q53GG5 364 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 PLBD1Q6P4A8 553 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 SHISA2Q6UWI4 295 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 UNQ6126/PRO20091Q6UXV3 157 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 FBXW12Q6X9E4 464 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 DOK3Q7L591 496 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 DCXRQ7Z4W1 244 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 NAA40Q86UY6 237 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 CPOQ8IVL8 374 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR6K6Q8NGW6 343 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 TAF15Q92804 592 aaKnown RBP eCLIP6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 RAB1CQ92928 201 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ELMOD3Q96FG2 381 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 TIMD4Q96H15 378 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 DUX5Q96PT3 197 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 AMELYQ99218 206 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 PITX2Q99697 317 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ATF6BQ99941 703 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 SEMA6AQ9H2E6 1030 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZNF556Q9HAH1 456 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 MMP26Q9NRE1 261 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 DECR2Q9NUI1 292 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 PTTG3PQ9NZH4 202 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 KIF17Q9P2E2 1029 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZNF69Q9UC07 566 aa6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 POLR3KQ9Y2Y1 108 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-210ENST00000462553 A0A1B0GWJ7 208 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 ISPDA4D126 451 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 SAC3D1A6NKF1 404 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 A8MXK9 166 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 IQCF6A8MYZ5 107 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 PRR23D1E9PI22 279 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 E9PQ18 207 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 F5H0A9 414 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 F5H5K5 113 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 G3V2T6 193 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 TRAPPC2LH3BP13 241 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 M0R135 149 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms