RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 POMT1Q9Y6A1 747 aa3.93□□□□□ -1.78
COPS3-204ENST00000462236 STARD9Q9P2P6 4700 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 DSCAML1Q8TD84 2053 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 TRBV5-5A0A0J9YX44 114 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 LOC100653049A0A140TA62 436 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 GNG14A0A1W2PPG7 69 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 TRIM49D1C9J1S8 452 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 RPL36A-HNRNPH2H7BZ11 118 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 EIF3HO15372 352 aaKnown RBP eCLIP3.92□□□□□ -1.78
COPS3-204ENST00000462236 PIN1P1O15428 100 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 TRMUO75648 421 aaKnown RBP3.92□□□□□ -1.78
COPS3-204ENST00000462236 KRT34O76011 436 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 CLPXO76031 633 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 OR4F21O95013 312 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 OTCP00480 354 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 GSTA2P09210 222 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 ANXA4P09525 319 aaPredicted RBP3.92□□□□□ -1.78
COPS3-204ENST00000462236 ZNF35P13682 527 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 CBR1P16152 277 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 SELEP16581 610 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 NTSP30990 170 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 CLK1P49759 484 aaKnown RBP3.92□□□□□ -1.78
COPS3-204ENST00000462236 P2RY4P51582 365 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 ATP12AP54707 1039 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 GUCY2DQ02846 1103 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 C2orf80Q0P641 193 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 OPCMLQ14982 345 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 KIAA0040Q15053 153 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 VAX1Q5SQQ9 334 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 CCNJQ5T5M9 372 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 OLFML2AQ68BL7 652 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 CASP12Q6UXS9 341 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 GPR141Q7Z602 305 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 ZNF329Q86UD4 541 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 FAM219AQ8IW50 185 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 ZBED8Q8IZ13 594 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 PSMA8Q8TAA3 256 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 ZNRF4Q8WWF5 429 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 CDKL2Q92772 493 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 ATP6V1E2Q96A05 226 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 C16orf58Q96GQ5 468 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 MS4A4EQ96PG1 132 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 LITAFQ99732 161 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 ZNF416Q9BWM5 594 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 EBPLQ9BY08 206 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 PIGUQ9H490 435 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 ZNF385DQ9H6B1 395 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 ARGLU1Q9NWB6 273 aaPredicted RBP3.92□□□□□ -1.78
COPS3-204ENST00000462236 MYEF2Q9P2K5 600 aaKnown RBP3.92□□□□□ -1.78
COPS3-204ENST00000462236 NUP50Q9UKX7 468 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 TMCO1Q9UM00 188 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 DSPPQ9NZW4 1301 aa3.92□□□□□ -1.78
COPS3-204ENST00000462236 SH3PXD2BA1X283 911 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 CLPSL1A2RUU4 121 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 OOEPA6NGQ2 149 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 G3V4G9 280 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 M0R233 179 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 NR5A2O00482 541 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 SCAMP2O15127 329 aaKnown RBP3.91□□□□□ -1.78
COPS3-204ENST00000462236 ZNF264O43296 627 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 PPIHO43447 177 aaKnown RBP3.91□□□□□ -1.78
COPS3-204ENST00000462236 FCGR3BO75015 233 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 NUDT14O95848 222 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 LGI1O95970 557 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 CFC1BP0CG36 223 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 CFC1P0CG37 223 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 HPGDP15428 266 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 OMGP23515 440 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 FKBP2P26885 142 aaKnown RBP3.91□□□□□ -1.78
COPS3-204ENST00000462236 GLRXP35754 106 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 MAGEA8P43361 318 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 BAMBIQ13145 260 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 NAB1Q13506 487 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 PDE7AQ13946 482 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 ZNF141Q15928 474 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 TAF9Q16594 264 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 ATP6AP1LQ52LC2 224 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 UNC50Q53HI1 259 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 REP15Q6BDI9 236 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 SLC25A47Q6Q0C1 308 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 PAQR6Q6TCH4 344 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 C3orf62Q6ZUJ4 267 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 LRP11Q86VZ4 500 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 MMGT1Q8N4V1 131 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 KIR3DL3Q8N743 410 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 COX18Q8N8Q8 333 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 OR7A2PQ8NGA2 310 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 PYROXD1Q8WU10 500 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 RAB39BQ96DA2 213 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 FCRL1Q96LA6 429 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 ZNF382Q96SR6 550 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 INTS14Q96SY0 518 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 NKX3-1Q99801 234 aaPredicted RBP3.91□□□□□ -1.78
COPS3-204ENST00000462236 KCNS3Q9BQ31 491 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 LINC00470Q9BZP3 86 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 NMUR2Q9GZQ4 415 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 HOXD1Q9GZZ0 328 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 NOX3Q9HBY0 568 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 DYNLRB1Q9NP97 96 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 LZTFL1Q9NQ48 299 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms