RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 FAM216AQ8WUB2 273 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 C4orf45Q96LM5 186 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 RDH12Q96NR8 316 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 COQ7Q99807 217 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 ATF6BQ99941 703 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 SYT3Q9BQG1 590 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 MRPL37Q9BZE1 423 aaKnown RBP12.49□□□□□ -0.41
NCK1-202ENST00000460960 HDHD2Q9H0R4 259 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 C1orf198Q9H425 327 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 CENPMQ9NSP4 180 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 DDX28Q9NUL7 540 aaKnown RBP12.49□□□□□ -0.41
NCK1-202ENST00000460960 STARD10Q9Y365 291 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 SPEF1Q9Y4P9 236 aa12.49□□□□□ -0.41
NCK1-202ENST00000460960 F5H5K5 113 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 PSMD9O00233 223 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 PPIHO43447 177 aaKnown RBP12.48□□□□□ -0.41
NCK1-202ENST00000460960 WBP4O75554 376 aaKnown RBP12.48□□□□□ -0.41
NCK1-202ENST00000460960 ABHD16AO95870 558 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 ACSM4P0C7M7 580 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 ALOX5APP20292 161 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 COL8A2P25067 703 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 HTR1FP30939 366 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 ALDH3B1P43353 468 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 PRSS12P56730 875 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 SSX6Q7RTT6 188 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 GID4Q8IVV7 300 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 OR51G2Q8NGK0 314 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 OR1J1Q8NGS3 322 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 CNIH3Q8TBE1 160 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 RNF133Q8WVZ7 376 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 GTF3AQ92664 365 aaKnown RBP12.48□□□□□ -0.41
NCK1-202ENST00000460960 JMJD8Q96S16 334 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 CNN2Q99439 309 aaKnown RBP12.48□□□□□ -0.41
NCK1-202ENST00000460960 ADI1Q9BV57 179 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 AMBNQ9NP70 447 aa12.48□□□□□ -0.41
NCK1-202ENST00000460960 MEGF8Q7Z7M0 2845 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 LOC105371242A0A075B767 164 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 SLC22A31A6NKX4 558 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 WNT9BO14905 357 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 ICMTO60725 284 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 HPXP02790 462 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 LCKP06239 509 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 SBK2P0C263 348 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 SLC2A1P11166 492 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 OTX1P32242 354 aaPredicted RBP12.47□□□□□ -0.41
NCK1-202ENST00000460960 GLRXP35754 106 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 CAPGP40121 348 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 OPRL1P41146 370 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 PRKXP51817 358 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 HILS1P60008 231 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 PPP1CBP62140 327 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 MAD2L1BPQ15013 274 aaPredicted RBP12.47□□□□□ -0.41
NCK1-202ENST00000460960 OCLNQ16625 522 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 ALKBH6Q3KRA9 238 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 SLC25A30Q5SVS4 291 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 LCN1P1Q5VSP4 162 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 LRRN1Q6UXK5 716 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 DHRSXQ8N5I4 330 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 ZNF555Q8NEP9 628 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 SLC25A40Q8TBP6 338 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 THEM6Q8WUY1 208 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 TRUB1Q8WWH5 349 aaKnown RBP12.47□□□□□ -0.41
NCK1-202ENST00000460960 MRPL24Q96A35 216 aaKnown RBP12.47□□□□□ -0.41
NCK1-202ENST00000460960 MARS2Q96GW9 593 aaKnown RBP12.47□□□□□ -0.41
NCK1-202ENST00000460960 TBX5Q99593 518 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 COPS4Q9BT78 406 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 OR2J1Q9GZK6 312 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 YIPF3Q9GZM5 350 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 C8orf4Q9NR00 106 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 SLCO1C1Q9NYB5 712 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 H2AFY2Q9P0M6 372 aaPredicted RBP12.47□□□□□ -0.41
NCK1-202ENST00000460960 ATPIF1Q9UII2 106 aa12.47□□□□□ -0.41
NCK1-202ENST00000460960 ZNF878C9JN71 531 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 PNPP00491 289 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 LYNP07948 512 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 ACHEP22303 614 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 IL5RAQ01344 420 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 ZNF91Q05481 1191 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 HLXQ14774 488 aaPredicted RBP12.46□□□□□ -0.41
NCK1-202ENST00000460960 SNAI3Q3KNW1 292 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 AWAT1Q58HT5 328 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 RGS7BPQ6MZT1 257 aaPredicted RBP12.46□□□□□ -0.41
NCK1-202ENST00000460960 SLC35F2Q8IXU6 374 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 IPCEF1Q8WWN9 437 aaPredicted RBP12.46□□□□□ -0.41
NCK1-202ENST00000460960 RDH5Q92781 318 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 MS4A5Q9H3V2 200 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 ZNF275Q9NSD4 429 aaPredicted RBP12.46□□□□□ -0.41
NCK1-202ENST00000460960 HAO2Q9NYQ3 351 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 WARS2Q9UGM6 360 aaKnown RBP12.46□□□□□ -0.41
NCK1-202ENST00000460960 PCDHGB1Q9Y5G3 927 aa12.46□□□□□ -0.41
NCK1-202ENST00000460960 TRAV20A0A0B4J274 112 aa12.45□□□□□ -0.42
NCK1-202ENST00000460960 A0A1W2PPW3 197 aa12.45□□□□□ -0.42
NCK1-202ENST00000460960 M0R135 149 aa12.45□□□□□ -0.42
NCK1-202ENST00000460960 ZNF250P15622 560 aa12.45□□□□□ -0.42
NCK1-202ENST00000460960 RAD52P43351 418 aa12.45□□□□□ -0.42
NCK1-202ENST00000460960 ISL1P61371 349 aa12.45□□□□□ -0.42
NCK1-202ENST00000460960 ECH1Q13011 328 aa12.45□□□□□ -0.42
NCK1-202ENST00000460960 PLEKHG7Q6ZR37 379 aa12.45□□□□□ -0.42
NCK1-202ENST00000460960 COLCA1Q6ZS62 124 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms