RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 AANATQ16613 207 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 TBC1D28Q2M2D7 210 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 LRRC75BQ2VPJ9 315 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 ZNF404Q494X3 552 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 FAM98BQ52LJ0 330 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 SPANXN3Q5MJ09 141 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 C9orf66Q5T8R8 295 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 SEL1L2Q5TEA6 688 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 GTF2H2CQ6P1K8 395 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 ZCCHC12Q6PEW1 402 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 PEX26Q7Z412 305 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 VMO1Q7Z5L0 202 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 ZER1Q7Z7L7 766 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 ZC3HC1Q86WB0 502 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 SNX32Q86XE0 403 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 CNGA4Q8IV77 575 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 ZNF584Q8IVC4 421 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 GCSAMQ8N6F7 178 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 OR2AK2Q8NG84 335 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 OR51G2Q8NGK0 314 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 OR1J1Q8NGS3 322 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 PRSS3P2Q8NHM4 247 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 BBS10Q8TAM1 723 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 NTN5Q8WTR8 489 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 ATP6V1E2Q96A05 226 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 CHP1Q99653 195 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 TAPBPLQ9BX59 468 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 EBPLQ9BY08 206 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 IQCGQ9H095 443 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 GLIPR2Q9H4G4 154 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 NOL11Q9H8H0 719 aaKnown RBP3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 TCF7L2Q9NQB0 619 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 SIRT7Q9NRC8 400 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 ERVK-18Q9QC07 812 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 PACSIN2Q9UNF0 486 aaPredicted RBP3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 RASD1Q9Y272 281 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 KPTNQ9Y664 436 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 PKHD1P08F94 4074 aa3.19□□□□□ -1.9
ECHDC1-211ENST00000460558 FLG2Q5D862 2391 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 KMT2AQ03164 3969 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 TMED7-TICAM2A0A0A6YYA0 188 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 IGLV5-39A0A0G2JS06 123 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 A0A1W2PRD5 423 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 A0A1W2PRF3 423 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 A0A1W2PRM7 423 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 LRRC30A6NM36 301 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 M0R3G1 203 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 UBXN8O00124 270 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 TIMM8AO60220 97 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 SCN2BO60939 215 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 GAGE7O76087 117 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 FSTL3O95633 263 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 CSTAP01040 98 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 GAGE12FP0CL80 117 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 GAGE12GP0CL81 117 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 GAGE12IP0CL82 117 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 CCL2P13500 99 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 ZNF43P17038 809 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 BDKRB2P30411 391 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 SLC6A1P30531 599 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 MPV17P39210 176 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 MYCNOSP40205 109 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 RGS6P49758 472 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 CCNG1P51959 295 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 POLR2HP52434 150 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 IL5RAQ01344 420 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 ACSM1Q08AH1 577 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 ILF2Q12905 390 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 GAGE1Q13065 139 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 GAGE4Q13068 117 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 CEACAM7Q14002 265 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 RBMS2Q15434 407 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 TWIST1Q15672 202 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 MTX3Q5HYI7 312 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 SPATA46Q5T0L3 261 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 THEM4Q5T1C6 240 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 PDZK1Q5T2W1 519 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 RNASEH2BQ5TBB1 312 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 PLBD1Q6P4A8 553 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 ZNF841Q6ZN19 808 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 LINC00336Q6ZUF6 198 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 Q75L30 129 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 GOLGA7Q7Z5G4 137 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 PIGWQ7Z7B1 504 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 CENPVQ7Z7K6 275 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 CCDC190Q86UF4 302 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 C1orf87Q8N0U7 546 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 MAPKAPK5-AS1Q8N8E1 139 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 OR2Z1Q8NG97 314 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 CLHC1Q8NHS4 586 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 THAP6Q8TBB0 222 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 KLF14Q8TD94 323 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 C16orf78Q8WTQ4 265 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 ITLN1Q8WWA0 313 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 SELENOMQ8WWX9 145 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 CDS1Q92903 461 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 TUBGCP3Q96CW5 907 aa3.18□□□□□ -1.9
ECHDC1-211ENST00000460558 OTUB1Q96FW1 271 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms