RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 SMAD6O43541 496 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 OR7C2O60412 319 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 OPN1LWP04000 364 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 SMIM6P0DI80 62 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 RRASP10301 218 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 PVRP15151 417 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 HOXC5Q00444 222 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 B3GNTL1Q67FW5 361 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 LYSMD2Q8IV50 215 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 SYS1Q8N2H4 156 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 WBP2Q969T9 261 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 AMBRA1Q9C0C7 1298 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 LAT2Q9GZY6 243 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 ESRP2Q9H6T0 727 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 SLC2A9Q9NRM0 540 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 TAS2R5Q9NYW4 299 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 CLEC1BQ9P126 229 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 USP3Q9Y6I4 520 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 TRIM77I1YAP6 450 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 HPP00738 406 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 S100A4P26447 101 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 SIAH3Q8IW03 269 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 UBAC2Q8NBM4 344 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 DDOQ99489 341 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 PRICKLE3O43900 615 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 LIM2P55344 173 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 PPIAP62937 165 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 MAT1AQ00266 395 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 COX19Q49B96 90 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 GTDC1Q4AE62 458 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 SLC35B4Q969S0 331 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 ELSPBP1Q96BH3 223 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 HCFC1R1Q9NWW0 138 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 FLVCR1Q9Y5Y0 555 aa8.11□□□□□ -1.11
SHROOM4-203ENST00000460112 H7C1C5 153 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 NCR1O76036 304 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 TCRBP04435 133 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 PSMB5P28074 263 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 MEOX2P50222 304 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 TMEM56Q96MV1 263 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 SMDT1Q9H4I9 107 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 LRRK1Q38SD2 2015 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 GPR37O15354 613 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 PIGAP37287 484 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 SUMO3P55854 103 aaPredicted RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 FBXL14Q8N1E6 418 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 OR13D1Q8NGV5 346 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 MVB12AQ96EY5 273 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 MRGPRX4Q96LA9 322 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 TRAF4Q9BUZ4 470 aaPredicted RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 RALYQ9UKM9 306 aaKnown RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 TRAPPC4Q9Y296 219 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 ZNF749O43361 778 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 EDN3P14138 238 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 OR2B8PP59922 312 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 LAIR1Q6GTX8 287 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 TMEM102Q8N9M5 508 aaPredicted RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 OR4F17Q8NGA8 305 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 OR2A1Q8NGT9 310 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 NRG4Q8WWG1 115 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 ARRDC3Q96B67 414 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 TNFRSF13CQ96RJ3 184 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 MYOZ1Q9NP98 299 aaPredicted RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 ARL2-SNX15V9GYD0 113 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 M0QZK8 103 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 GGCTO75223 188 aaKnown RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 CSNK1EP49674 416 aaKnown RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 CLN3Q13286 438 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 PNLIPRP3Q17RR3 467 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 FAM26DQ5JW98 314 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 C1orf220Q5T0J3 134 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 RPS19BP1Q86WX3 136 aaKnown RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 ARHGEF39Q8N4T4 335 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 MOB3AQ96BX8 217 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 GALMQ96C23 342 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 SBF1O95248 1867 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 GLULP15104 373 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 NME1P15531 152 aaKnown RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 IGFBP7Q16270 282 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 TOR2AQ5JU69 321 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 DRAM2Q6UX65 266 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 FA2HQ7L5A8 372 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 FIZ1Q96SL8 496 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 THAP10Q9P2Z0 257 aaPredicted RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 FBXL2Q9UKC9 423 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 TET1Q8NFU7 2136 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 MS4A18H0YCH9 400 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 CSO75390 466 aaKnown RBP8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 SLCO2B1O94956 709 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 ACSM4P0C7M7 580 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 FAM189BP81408 668 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 AQP6Q13520 282 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 MS4A18Q3C1V0 323 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 NKAIN2Q5VXU1 208 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 UBE3DQ7Z6J8 389 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 ANGPTL5Q86XS5 388 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 LINC00346Q8IVM7 164 aa8.1□□□□□ -1.11
SHROOM4-203ENST00000460112 TMEFF1Q8IYR6 380 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms