RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 UTP4Q969X6 686 aaKnown RBP13.87□□□□□ -0.19
SHANK2-213ENST00000460048 NRBF2Q96F24 287 aa13.87□□□□□ -0.19
SHANK2-213ENST00000460048 FAHD2AQ96GK7 314 aa13.87□□□□□ -0.19
SHANK2-213ENST00000460048 INTS14Q96SY0 518 aa13.87□□□□□ -0.19
SHANK2-213ENST00000460048 TMPRSS13Q9BYE2 586 aa13.87□□□□□ -0.19
SHANK2-213ENST00000460048 PATZ1Q9HBE1 687 aaKnown RBP13.87□□□□□ -0.19
SHANK2-213ENST00000460048 UBAP1Q9NZ09 502 aa13.87□□□□□ -0.19
SHANK2-213ENST00000460048 CD300LBA8K4G0 201 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 PRR23D1E9PI22 279 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-213ENST00000460048 F5H0A9 414 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-213ENST00000460048 TIPRLO75663 272 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 HMGN1P05114 100 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 PRR23D2P0DMB1 279 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-213ENST00000460048 PAICSP22234 425 aaKnown RBP13.86□□□□□ -0.19
SHANK2-213ENST00000460048 PMELP40967 661 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 GATA4P43694 442 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 GRB2P62993 217 aaKnown RBP13.86□□□□□ -0.19
SHANK2-213ENST00000460048 MAB21L1Q13394 359 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 TAF13Q15543 124 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 ZNF771Q7L3S4 317 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-213ENST00000460048 ERI1Q8IV48 349 aaKnown RBP13.86□□□□□ -0.19
SHANK2-213ENST00000460048 SPICQ8N5J4 248 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 RFLNBQ8N5W9 214 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 CELF2-AS1Q8N7Q2 184 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 RNF133Q8WVZ7 376 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 OTULINQ96BN8 352 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 ABHD6Q9BV23 337 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 OR51V1Q9H2C8 321 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 TOR3AQ9H497 397 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 SLC25A19Q9HC21 320 aa13.86□□□□□ -0.19
SHANK2-213ENST00000460048 PPIAL4EA0A075B759 164 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 PPIAL4CA0A0B4J2A2 164 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 A0A0G2JMP0 313 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 A0A0X1KG70 313 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 PPIAL4DF5H284 164 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 J3QLI3 93 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 PRODHO43272 600 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 ATP5HO75947 161 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 FSTL3O95633 263 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 CYB5R3P00387 301 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-213ENST00000460048 PPIAL4FP0DN26 164 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 SLC2A1P11166 492 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 GATA3P23771 443 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 ZFP36P26651 326 aaKnown RBP13.85□□□□□ -0.19
SHANK2-213ENST00000460048 MDH2P40926 338 aaKnown RBP13.85□□□□□ -0.19
SHANK2-213ENST00000460048 CD200P41217 278 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 SLC15A1P46059 708 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 RASSF2P50749 326 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 RAD23AP54725 363 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 LCN2P80188 198 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 SRSF2Q01130 221 aaKnown RBP13.85□□□□□ -0.19
SHANK2-213ENST00000460048 PLBD1Q6P4A8 553 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 FAHD1Q6P587 224 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 SPATC1Q76KD6 591 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 RHOUQ7L0Q8 258 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 SHFQ7M4L6 423 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 PRSS45Q7RTY3 260 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 MOGAT3Q86VF5 341 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 KLHL36Q8N4N3 616 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 OR4M2Q8NGB6 313 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 SPRYD4Q8WW59 207 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-213ENST00000460048 DNAJC9Q8WXX5 260 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 SPSB4Q96A44 273 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 AMELYQ99218 206 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 SLC22A4Q9H015 551 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 METTL17Q9H7H0 456 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-213ENST00000460048 METRNQ9UJH8 293 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 PCDHB10Q9UN67 800 aa13.85□□□□□ -0.19
SHANK2-213ENST00000460048 POLR3KQ9Y2Y1 108 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-213ENST00000460048 IGHV3-64DA0A0J9YX35 117 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 XRCC2O43543 280 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 FOXH1O75593 365 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 SLC2A5P22732 501 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 CX3CR1P49238 355 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 DAPP51397 102 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 DCAF12L2Q5VW00 463 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 TMEM236Q5W0B7 351 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 CPOQ8IVL8 374 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 MUC20Q8N307 709 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-213ENST00000460048 OR5K1Q8NHB7 308 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 Q8TCH9 128 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 ERGIC1Q969X5 290 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 ZMYND19Q96E35 227 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-213ENST00000460048 MMADHCQ9H3L0 296 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-213ENST00000460048 OPA3Q9H6K4 179 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 TMEM165Q9HC07 324 aa13.84□□□□□ -0.19
SHANK2-213ENST00000460048 LOC105371242A0A075B767 164 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 GGT3PA6NGU5 568 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 CEACAM18A8MTB9 384 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 A8MXK9 166 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 TCF21O43680 179 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 GMDSO60547 372 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 SELENOFO60613 162 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 PTBP3O95758 552 aaKnown RBP13.83□□□□□ -0.2
SHANK2-213ENST00000460048 WNT2P09544 360 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 CA6P23280 308 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 OPRL1P41146 370 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 CRISP1P54107 249 aa13.83□□□□□ -0.2
SHANK2-213ENST00000460048 SEC61A1P61619 476 aaKnown RBP13.83□□□□□ -0.2
SHANK2-213ENST00000460048 OR8G1Q15617 311 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms