RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 TBX1O43435 398 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 DBHP09172 617 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 EPHA2P29317 976 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 IL5RAQ01344 420 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 ACBD7Q8N6N7 88 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 OR51G2Q8NGK0 314 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 OR11L1Q8NGX0 322 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 RNFT2Q96EX2 444 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 TMUB1Q9BVT8 246 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 JAM3Q9BX67 310 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 SAP30LQ9HAJ7 183 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 TRIM36Q9NQ86 728 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 CHCHD3Q9NX63 227 aaKnown RBP9.14□□□□□ -0.95
UBR4-208ENST00000459947 R4GMQ9 66 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 A0A1B0GWJ7 208 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 CYSRT1A8MQ03 144 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 CLPTM1O96005 669 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 GNALP38405 381 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 MPV17P39210 176 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 ALDH3B1P43353 468 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 ZNF121P58317 390 aaPredicted RBP9.14□□□□□ -0.95
UBR4-208ENST00000459947 TNFAIP6P98066 277 aaPredicted RBP9.14□□□□□ -0.95
UBR4-208ENST00000459947 LOXL1Q08397 574 aaPredicted RBP9.14□□□□□ -0.95
UBR4-208ENST00000459947 C1orf87Q8N0U7 546 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 LRP12Q9Y561 859 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 POLR2IP36954 125 aaKnown RBP9.13□□□□□ -0.95
UBR4-208ENST00000459947 CHN2P52757 468 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 HFEQ30201 348 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 SYS1Q8N2H4 156 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 OR10H4Q8NGA5 316 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 RAB1CQ92928 201 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 MPC1Q9Y5U8 109 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 CADP27708 2225 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 DAPL1A0PJW8 107 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 EFCAB10A6NFE3 127 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 CLDN25C9JDP6 229 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 LOC110117498-PIK3R3F6TDL0 507 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 PCMT1P22061 227 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 CRYBB2P43320 205 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 MAP2K3P46734 347 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 GZMKP49863 264 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 MMP15P51511 669 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 ERVS71-1P61550 626 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 ADARB1P78563 741 aaKnown RBP9.13□□□□□ -0.95
UBR4-208ENST00000459947 MAD2L1BPQ15013 274 aaPredicted RBP9.13□□□□□ -0.95
UBR4-208ENST00000459947 ZNF181Q2M3W8 571 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 SPATA46Q5T0L3 261 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 BCL2L15Q5TBC7 163 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 LYPD4Q6UWN0 246 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 ENTHD1Q8IYW4 607 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 SLC7A6Q92536 515 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 C18orf12Q96KH6 178 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 COX4I2Q96KJ9 171 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 SLC30A2Q9BRI3 323 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 EXOSC1Q9Y3B2 195 aaKnown RBP9.13□□□□□ -0.95
UBR4-208ENST00000459947 TMEM269A0A1B0GVZ9 245 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 LRRC30A6NM36 301 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 CD300LBA8K4G0 201 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 ENTPD6O75354 484 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 FSTL3O95633 263 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 MRPL3P09001 348 aaKnown RBP9.13□□□□□ -0.95
UBR4-208ENST00000459947 CCDC159P0C7I6 412 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 GABRB1P18505 474 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 CD200P41217 278 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 RSPO1Q2MKA7 263 aaPredicted RBP9.13□□□□□ -0.95
UBR4-208ENST00000459947 FAM57BQ71RH2 274 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 LRP11Q86VZ4 500 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 REEP6Q96HR9 211 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 Q9H521 79 aa9.13□□□□□ -0.95
UBR4-208ENST00000459947 FLNBO75369 2602 aaKnown RBP9.13□□□□□ -0.95
UBR4-208ENST00000459947 IGHV1-46P01743 117 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 ZNF91Q05481 1191 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 GK2Q14410 553 aaPredicted RBP9.12□□□□□ -0.95
UBR4-208ENST00000459947 MSMPQ1L6U9 139 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 GLYATL3Q5SZD4 288 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 KRTAP1-3Q8IUG1 177 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 TEX29Q8N6K0 151 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 YIPF7Q8N8F6 280 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 C10orf35Q96D05 121 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 TECTBQ96PL2 329 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 MICU1Q9BPX6 476 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 FGF20Q9NP95 211 aaPredicted RBP9.12□□□□□ -0.95
UBR4-208ENST00000459947 CNOT2Q9NZN8 540 aaKnown RBP9.12□□□□□ -0.95
UBR4-208ENST00000459947 FZR1Q9UM11 496 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 PRR14LQ5THK1 2151 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 ANXA2P2A6NMY6 339 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 PIPP12273 146 aaPredicted RBP9.12□□□□□ -0.95
UBR4-208ENST00000459947 DCKP27707 260 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 GPR6P46095 362 aaPredicted RBP9.12□□□□□ -0.95
UBR4-208ENST00000459947 CXCR4P61073 352 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 USP51Q70EK9 711 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 THAP5Q7Z6K1 395 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 REG4Q9BYZ8 158 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 IGHV1-69-2A0A0G2JMI3 117 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 DBTP11182 482 aaKnown RBP9.12□□□□□ -0.95
UBR4-208ENST00000459947 IRF2P14316 349 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 OR8G1Q15617 311 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 FDX2Q6P4F2 183 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 LRRN1Q6UXK5 716 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 TMPRSS11AQ6ZMR5 421 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms