RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 VDAC3Q9Y277 283 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 MRPS28Q9Y2Q9 187 aaKnown RBP7.86□□□□□ -1.15
HDAC3-202ENST00000459727 RHBDD3Q9Y3P4 386 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 CACNA1AO00555 2505 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 F5P12259 2224 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 ATG2BQ96BY7 2078 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 LOC102723996A0A087X1L8 192 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 SERPINE3A8MV23 424 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 C9J4A7 227 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 H3BML4 177 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 M0QYG6 137 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 TRAF3IP2O43734 574 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 RAD1O60671 282 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 MPZL1O95297 269 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 IGHEP01854 428 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 FGF2P09038 288 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 VSIG8P0DPA2 414 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 FGF5P12034 268 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 HIST1H1DP16402 221 aaKnown RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 MSR1P21757 451 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 PLA2G5P39877 138 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 DUSP3P51452 185 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF133P52736 654 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 NAAAQ02083 359 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 CCDC157Q569K6 752 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 TMEM128Q5BJH2 165 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 C10orf128Q5T292 105 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 LYSMD4Q5XG99 296 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF385CQ66K41 422 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 EIF5AL1Q6IS14 154 aaKnown RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 ARSKQ6UWY0 536 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 TMPRSS9Q7Z410 1059 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 ABHD12BQ7Z5M8 362 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 PEG10Q86TG7 708 aaKnown RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 COMMD2Q86X83 199 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 GTPBP8Q8N3Z3 284 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 SPERTQ8NA61 448 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 BVESQ8NE79 360 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 TMEM185AQ8NFB2 350 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 GJC3Q8NFK1 279 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 PXT1Q8NFP0 134 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 OR13C8Q8NGS7 320 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 OR13C9Q8NGT0 318 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 OR4K15Q8NH41 348 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 ST8SIA2Q92186 375 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 DVL3Q92997 716 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 FBXW5Q969U6 566 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 RAB3CQ96E17 227 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 FOXN4Q96NZ1 517 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 OR5B2Q96R09 309 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 SLC6A7Q99884 636 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 VRK1Q99986 396 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 WDR77Q9BQA1 342 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 NMES1Q9C002 83 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 PIGMQ9H3S5 423 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 RAB18Q9NP72 206 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 RASL12Q9NYN1 266 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF391Q9UJN7 358 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 FARSAQ9Y285 508 aaKnown RBP7.85□□□□□ -1.15
HDAC3-202ENST00000459727 MEMO1Q9Y316 297 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 HEATR5AQ86XA9 2040 aa7.85□□□□□ -1.15
HDAC3-202ENST00000459727 CHD7Q9P2D1 2997 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 MEIS3P1A6NDR6 274 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 SULT2B1O00204 365 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 CDC14BO60729 498 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 SIX6O95475 246 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 KLK3P07288 261 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-202ENST00000459727 HCKP08631 526 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 PRF1P14222 555 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF28P17035 718 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 IL11P20809 199 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 FPR2P25090 351 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 DLSTP36957 453 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 PTGDSP41222 190 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 CSNK1A1P48729 337 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF84P51523 738 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF121P58317 390 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-202ENST00000459727 UNC119Q13432 240 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 GFOD2Q3B7J2 385 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 LY6G6FQ5SQ64 297 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 FAM69BQ5VUD6 431 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 DCAF12L2Q5VW00 463 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF660Q6AZW8 331 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-202ENST00000459727 Q6ZSR3 168 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 TMPPEQ6ZT21 453 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 FOXL2NBQ6ZUU3 175 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 MDGA2Q7Z553 956 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 BIVMQ86UB2 503 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 HOGA1Q86XE5 327 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 ANGPTL5Q86XS5 388 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF283Q8N7M2 679 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 BMPERQ8N8U9 685 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 GALNT11Q8NCW6 608 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 OR52N4Q8NGI2 321 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 OR52H1Q8NGJ2 320 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 OR5H2Q8NGV7 314 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 TERB2Q8NHR7 220 aa7.84□□□□□ -1.15
HDAC3-202ENST00000459727 STOML3Q8TAV4 291 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms