RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 OR10AD1Q8NGE0 317 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 OR13G1Q8NGZ3 307 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 OR2AE1Q8NHA4 323 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 ITLN1Q8WWA0 313 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 TIMD4Q96H15 378 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 SLC30A2Q9BRI3 323 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 N6AMT1Q9Y5N5 214 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 NAV3Q8IVL0 2385 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 CCDC182A6NF36 153 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 CRLF1O75462 422 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 OPRL1P41146 370 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 ZNF92Q03936 586 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 SLC3A1Q07837 685 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 GLYATL3Q5SZD4 288 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 RHOUQ7L0Q8 258 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 CBR4Q8N4T8 237 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 TCEANCQ8N8B7 351 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 TMEM163Q8TC26 289 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 THEM6Q8WUY1 208 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 EME1Q96AY2 570 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 OR2V2Q96R30 315 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 DNAJC27Q9NZQ0 273 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 KCNS2Q9ULS6 477 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 WIPI2Q9Y4P8 454 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 MALRD1Q5VYJ5 2156 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 ABCA2Q9BZC7 2435 aa17.56■□□□□ 0.4
VARS-218ENST00000459667 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.55■□□□□ 0.42e-12■■■■■ 36.1
VARS-218ENST00000459667 C5orf63A6NC05 138 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 H0YL77 283 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 MLNRO43193 412 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 TBX1O43435 398 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 LMX1BO60663 402 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 TGFAP01135 160 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 APOC1P02654 83 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 ANXA2P07355 339 aaKnown RBP17.55■□□□□ 0.4
VARS-218ENST00000459667 H2BFMP0C1H6 154 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 CDC42P60953 191 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 ZBTB49Q6ZSB9 765 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 SLC16A9Q7RTY1 509 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 LINC01356Q8N9X3 169 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 SPRYD4Q8WW59 207 aaPredicted RBP17.55■□□□□ 0.4
VARS-218ENST00000459667 RAB1CQ92928 201 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 TEAD3Q99594 435 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 TMEM100Q9NV29 134 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 KLHDC2Q9Y2U9 406 aa17.55■□□□□ 0.4
VARS-218ENST00000459667 DYSFO75923 2080 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 XRCC2O43543 280 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 MRPL3P09001 348 aaKnown RBP17.54■□□□□ 0.4
VARS-218ENST00000459667 CDH15P55291 814 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 NXNL2Q5VZ03 156 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 BCDIN3DQ7Z5W3 292 aaKnown RBP17.54■□□□□ 0.4
VARS-218ENST00000459667 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.54■□□□□ 0.4
VARS-218ENST00000459667 GID4Q8IVV7 300 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 C1orf159Q96HA4 380 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 REPIN1Q9BWE0 567 aaKnown RBP17.54■□□□□ 0.4
VARS-218ENST00000459667 YIPF3Q9GZM5 350 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 OPA3Q9H6K4 179 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 SP140LQ9H930 580 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 TMEM106BQ9NUM4 274 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 TMEM160Q9NX00 188 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 LAMP5Q9UJQ1 280 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 PPP1R3CQ9UQK1 317 aa17.54■□□□□ 0.4
VARS-218ENST00000459667 GGT3PA6NGU5 568 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 SLC22A31A6NKX4 558 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 CD300LBA8K4G0 201 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 HLA-DPB1P04440 258 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 ALOX5APP20292 161 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 POLR2IP36954 125 aaKnown RBP17.53■□□□□ 0.4
VARS-218ENST00000459667 SRP9P49458 86 aaKnown RBP17.53■□□□□ 0.4
VARS-218ENST00000459667 ZNF121P58317 390 aaPredicted RBP17.53■□□□□ 0.4
VARS-218ENST00000459667 EFNB1P98172 346 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 HNRNPA0Q13151 305 aaKnown RBP17.53■□□□□ 0.4
VARS-218ENST00000459667 FAM57BQ71RH2 274 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 PEG10Q86TG7 708 aaKnown RBP17.53■□□□□ 0.4
VARS-218ENST00000459667 OR8J1Q8NGP2 316 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 MEGF10Q96KG7 1140 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 IL4I1Q96RQ9 567 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 IMPAD1Q9NX62 359 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 DCAF16Q9NXF7 216 aa17.53■□□□□ 0.4
VARS-218ENST00000459667 ANK3Q12955 4377 aaKnown RBP17.53■□□□□ 0.4
VARS-218ENST00000459667 A0A1B0GWJ7 208 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 ISPDA4D126 451 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 F5H5P2 479 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 HCCSP53701 268 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 LMO4P61968 165 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 TIGD6Q17RP2 521 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 AADACL4Q5VUY2 407 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 LRRN1Q6UXK5 716 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 MEPCEQ7L2J0 689 aaKnown RBP17.52■□□□□ 0.4
VARS-218ENST00000459667 CNN2Q99439 309 aaKnown RBP17.52■□□□□ 0.4
VARS-218ENST00000459667 ZNF665Q9H7R5 613 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 BRD7Q9NPI1 651 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 NPTNQ9Y639 398 aa17.52■□□□□ 0.4
VARS-218ENST00000459667 ERICH4A6NGS2 130 aa17.51■□□□□ 0.39
VARS-218ENST00000459667 B4DSR2 109 aa17.51■□□□□ 0.39
VARS-218ENST00000459667 FAM157AC9JC47 383 aa17.51■□□□□ 0.39
VARS-218ENST00000459667 ANKRD65E5RJM6 399 aa17.51■□□□□ 0.39
VARS-218ENST00000459667 RBMXP38159 391 aaKnown RBP17.51■□□□□ 0.39
VARS-218ENST00000459667 MMP16P51512 607 aa17.51■□□□□ 0.39
VARS-218ENST00000459667 ZIK1Q3SY52 487 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms