RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CD40LGP29965 261 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 ARR3P36575 388 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 ETV6P41212 452 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 SLC6A9P48067 706 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 BMXP51813 675 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 CAPZA1P52907 286 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 PER3P56645 1201 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 SCAND1P57086 179 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 ZNF121P58317 390 aaPredicted RBP7.83□□□□□ -1.16
VPS50-207ENST00000458530 ARF1P84077 181 aaKnown RBP7.83□□□□□ -1.16
VPS50-207ENST00000458530 RBPJQ06330 500 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 PLEKHN1Q494U1 663 aaPredicted RBP7.83□□□□□ -1.16
VPS50-207ENST00000458530 OTPQ5XKR4 325 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 FBXW9Q5XUX1 488 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 ANKRD16Q6P6B7 361 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 C16orf87Q6PH81 154 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
VPS50-207ENST00000458530 NKAIN3Q8N8D7 197 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 OR10S1Q8NGN2 331 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 OR1F12Q8NHA8 337 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 RGP1Q92546 391 aaPredicted RBP7.83□□□□□ -1.16
VPS50-207ENST00000458530 ITFG2Q969R8 447 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 ZNF799Q96GE5 643 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 POM121Q96HA1 1249 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 PGAM5Q96HS1 289 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 DCLRE1CQ96SD1 692 aaKnown RBP7.83□□□□□ -1.16
VPS50-207ENST00000458530 SH3GL3Q99963 347 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 KCNS3Q9BQ31 491 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 SLC30A2Q9BRI3 323 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 BARHL1Q9BZE3 327 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 OR10A2Q9H208 303 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 RNF121Q9H920 327 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 PLEKHA1Q9HB21 404 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 PNRC2Q9NPJ4 139 aaKnown RBP7.83□□□□□ -1.16
VPS50-207ENST00000458530 G6PC2Q9NQR9 355 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 ABRACLQ9P1F3 81 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 RABL2AQ9UBK7 228 aaPredicted RBP7.83□□□□□ -1.16
VPS50-207ENST00000458530 FBXL3Q9UKT7 428 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 CLEC4AQ9UMR7 237 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 RABL2BQ9UNT1 228 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 FOXJ3Q9UPW0 622 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 MED13LQ71F56 2210 aa7.83□□□□□ -1.16
VPS50-207ENST00000458530 SVILO95425 2214 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 A0A0U1RQV5 110 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 MBD3L4A6NDZ8 208 aaPredicted RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 MBD3L3A6NE82 208 aaPredicted RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 MBD3L5A6NJ08 208 aaPredicted RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 MTRF1O75570 445 aaKnown RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 WNT11O96014 354 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 PNPP00491 289 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 TTRP02766 147 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 TPOP07202 933 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 ERCC1P07992 297 aaPredicted RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 INHBBP09529 407 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 CLEC2LP0C7M8 214 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 COX5BP10606 129 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 ZNF20P17024 532 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 ZNF32P17041 273 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 PTBP1P26599 531 aaKnown RBP eCLIP7.82□□□□□ -1.16
VPS50-207ENST00000458530 HOXC12P31275 282 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 OTX1P32242 354 aaPredicted RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 NTF4P34130 210 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 TALDO1P37837 337 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 HTR5AP47898 357 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 SOX2P48431 317 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 PRKXP51817 358 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 GALK2Q01415 458 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 PLP2Q04941 152 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 FAPQ12884 760 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 INSL4Q14641 139 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 TESK1Q15569 626 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 ODF4Q2M2E3 257 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 CCDC92Q53HC0 331 aaPredicted RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 IDNKQ5T6J7 187 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 FAM27D1Q5T7N8 215 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 C1orf185Q5T7R7 199 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 ZNF585AQ6P3V2 769 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 METAP1DQ6UB28 335 aaPredicted RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 BAIAP2L2Q6UXY1 529 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 DOK3Q7L591 496 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 NUFIP2Q7Z417 695 aaKnown RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 C1orf162Q8NEQ5 155 aaPredicted RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 OR5M9Q8NGP3 310 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 MBD3L2Q8NHZ7 208 aaPredicted RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 SNRNP40Q96DI7 357 aaKnown RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 FBXO17Q96EF6 278 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 CMTM3Q96MX0 182 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 OR2H1Q9GZK4 316 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 RGCCQ9H4X1 137 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 C12orf49Q9H741 205 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 NEK6Q9HC98 313 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 MOV10Q9HCE1 1003 aaKnown RBP7.82□□□□□ -1.16
VPS50-207ENST00000458530 BRD7Q9NPI1 651 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 SLC22A13Q9Y226 551 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 V9GY05 133 aa7.82□□□□□ -1.16
VPS50-207ENST00000458530 INTS1Q8N201 2190 aaKnown RBP7.81□□□□□ -1.16
VPS50-207ENST00000458530 DHRS7CA6NNS2 312 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 F5H5K5 113 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 AIPO00170 330 aa7.81□□□□□ -1.16
VPS50-207ENST00000458530 P2RY10O00398 339 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms