RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MED18Q9BUE0 208 aa17.81■□□□□ 0.44
SNX27-204ENST00000458013 PLA2G3Q9NZ20 509 aa17.81■□□□□ 0.44
SNX27-204ENST00000458013 TIMM9Q9Y5J7 89 aa17.81■□□□□ 0.44
SNX27-204ENST00000458013 HMGA1P17096 107 aaKnown RBP17.8■□□□□ 0.44
SNX27-204ENST00000458013 GABRB1P18505 474 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 PTTG1IPP53801 180 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 ASB16Q96NS5 453 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 OR51I2Q9H344 312 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 A0A1B0GTL3 188 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 ZNF195O14628 629 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 ADRB1P08588 477 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 NID1P14543 1247 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 TIMD4Q96H15 378 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 DERL3Q96Q80 235 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 Q1RN00 199 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 MAMSTRQ6ZN01 415 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 CISD2Q8N5K1 135 aaKnown RBP17.8■□□□□ 0.44
SNX27-204ENST00000458013 PDGFBP01127 241 aaPredicted RBP17.8■□□□□ 0.44
SNX27-204ENST00000458013 HES7Q9BYE0 225 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 SLC2A8Q9NY64 477 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 C19orf53Q9UNZ5 99 aaPredicted RBP17.8■□□□□ 0.44
SNX27-204ENST00000458013 IGLV3-10A0A075B6K4 115 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 G3V3Q6 166 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 OR5AP2Q8NGF4 316 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 LURAP1Q96LR2 239 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 LOXL2Q9Y4K0 774 aa17.8■□□□□ 0.44
SNX27-204ENST00000458013 HEXAP06865 529 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 SELEP16581 610 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 METAP1P53582 386 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 PRSS12P56730 875 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 OTUD1Q5VV17 481 aaPredicted RBP17.79■□□□□ 0.44
SNX27-204ENST00000458013 SEH1LQ96EE3 360 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 MENTQ9BUN1 341 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 DCAF16Q9NXF7 216 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 TCRBV5S2A0A599 114 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 ADAM10O14672 748 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 SLC25A21Q9BQT8 299 aaPredicted RBP17.79■□□□□ 0.44
SNX27-204ENST00000458013 SPNS1Q9H2V7 528 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 PRSS37A4D1T9 235 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 CT45A10P0DMU9 189 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 EPHA2P29317 976 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 FABP9Q0Z7S8 132 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 BAK1Q16611 211 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 THEM4Q5T1C6 240 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 OR10P1Q8NGE3 313 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 CBY3A6NI87 242 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 COX7A2P2O60397 106 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 EIF4E2O60573 245 aaKnown RBP17.79■□□□□ 0.44
SNX27-204ENST00000458013 CCL7P80098 99 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 ZDHHC23Q8IYP9 409 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 MYO18AQ92614 2054 aaKnown RBP17.79■□□□□ 0.44
SNX27-204ENST00000458013 TCRBV5S1A1TA0A578 114 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 ZNF320A2RRD8 509 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 DBX1A6NMT0 343 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 GIPP09681 153 aaPredicted RBP17.79■□□□□ 0.44
SNX27-204ENST00000458013 FAHP16930 419 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 CST5P28325 142 aaPredicted RBP17.79■□□□□ 0.44
SNX27-204ENST00000458013 FOXF1Q12946 379 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 SLC25A26Q70HW3 274 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 MOB3BQ86TA1 216 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 VPS25Q9BRG1 176 aa17.79■□□□□ 0.44
SNX27-204ENST00000458013 ZNF629Q9UEG4 869 aaPredicted RBP17.79■□□□□ 0.44
SNX27-204ENST00000458013 UPK1AO00322 258 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 PRDX4Q13162 271 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 BTBD17A6NE02 478 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 Q6ZNX1 250 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 TMEM230Q96A57 120 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 SRRQ9GZT4 340 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 MSL2Q9HCI7 577 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.78■□□□□ 0.44
SNX27-204ENST00000458013 SP6Q3SY56 376 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 AFMIDQ63HM1 303 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 ELSPBP1Q96BH3 223 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 KCNIP2Q9NS61 270 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 GDF2Q9UK05 429 aaPredicted RBP17.78■□□□□ 0.44
SNX27-204ENST00000458013 RNF224P0DH78 156 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 ACTR3CQ9C0K3 210 aaPredicted RBP17.78■□□□□ 0.44
SNX27-204ENST00000458013 CMC2Q9NRP2 79 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 TREM2Q9NZC2 230 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 HTRA4P83105 476 aaPredicted RBP17.78■□□□□ 0.44
SNX27-204ENST00000458013 FBXL6Q8N531 539 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 ZNF784Q8NCA9 323 aaPredicted RBP17.78■□□□□ 0.44
SNX27-204ENST00000458013 BAHD1Q8TBE0 780 aaPredicted RBP17.78■□□□□ 0.44
SNX27-204ENST00000458013 R4GMQ9 66 aa17.78■□□□□ 0.44
SNX27-204ENST00000458013 H7BYZ3 331 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 CLEC9AQ6UXN8 241 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 ALKBH3Q96Q83 286 aaPredicted RBP17.77■□□□□ 0.44
SNX27-204ENST00000458013 ST3GAL6Q9Y274 331 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 RFPL4AA6NLU0 287 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 RFPL4AL1F8VTS6 287 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 C1QBP02746 253 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 RBP4P02753 201 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 CCL2P13500 99 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 DUSP8Q13202 625 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 RAB35Q15286 201 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 OR2AK2Q8NG84 335 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 ZAR1LA6NP61 321 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 FCRL6Q6DN72 434 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 ACSM6Q6P461 480 aa17.77■□□□□ 0.44
SNX27-204ENST00000458013 ZGLP1P0C6A0 271 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms