RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 RFPL4BQ6ZWI9 263 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 LUZP2Q86TE4 346 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 RTN4RL2Q86UN3 420 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 LYPD6Q86Y78 171 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 ZNF101Q8IZC7 436 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 OR5AS1Q8N127 324 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 DTX3Q8N9I9 347 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 OR14K1Q8NGZ2 314 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 MCFD2Q8NI22 146 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 SLC25A46Q96AG3 418 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 SGK3Q96BR1 496 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 ZNF799Q96GE5 643 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 FAM71F1Q96KD3 344 aaPredicted RBP7.57□□□□□ -1.2
RIF1-208ENST00000457745 POM121L2Q96KW2 1035 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 KCTD7Q96MP8 289 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 TSC22D3Q99576 134 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 COQ7Q99807 217 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 MED18Q9BUE0 208 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 KCNN2Q9H2S1 579 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 CXorf56Q9H5V9 222 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 SMURF1Q9HCE7 757 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 NPAP1Q9NZP6 1156 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 PROCRQ9UNN8 238 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 TIMM10BQ9Y5J6 103 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 NBASA2RRP1 2371 aa7.57□□□□□ -1.2
RIF1-208ENST00000457745 RP1L1Q8IWN7 2480 aaPredicted RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 IGKV1-9A0A0C4DH69 117 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 VGLL3A8MV65 326 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 CASKO14936 926 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 TBX1O43435 398 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 TMCC2O75069 709 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 CLPXO76031 633 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 PRB1P04280 392 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 GABRA1P14867 456 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 ZNF14P17017 642 aaPredicted RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 BMP5P22003 454 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 GALP22466 123 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 DCTDP32321 178 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 CAPZA2P47755 286 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 MTNR1BP49286 362 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 PER3P56645 1201 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 RAB1AP62820 205 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 GRB2P62993 217 aaKnown RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 ADORA2A-AS1P86434 159 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 ZNF92Q03936 586 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 FAM27E3Q08E93 113 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 SCRN3Q0VDG4 424 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 SNTB1Q13884 538 aaKnown RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 TAF13Q15543 124 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 ZNF829Q3KNS6 432 aaPredicted RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 TIMM50Q3ZCQ8 353 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 NRN1LQ496H8 165 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 HES5Q5TA89 166 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 OR2A2Q6IF42 318 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 METAP1DQ6UB28 335 aaPredicted RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 COLCA1Q6ZS62 124 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 LAX1Q8IWV1 398 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 MS4A15Q8N5U1 240 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 GPR148Q8TDV2 347 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 TSEN15Q8WW01 171 aaKnown RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 TMEM106AQ96A25 262 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 FGGYQ96C11 551 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 MRPL48Q96GC5 212 aaKnown RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 PGAM5Q96HS1 289 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 HDHD2Q9H0R4 259 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 OR51B6Q9H340 312 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 TP63Q9H3D4 680 aaPredicted RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 NIPAL2Q9H841 368 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 CGGBP1Q9UFW8 167 aaPredicted RBP7.56□□□□□ -1.2
RIF1-208ENST00000457745 OSGIN2Q9Y236 505 aa7.56□□□□□ -1.2
RIF1-208ENST00000457745 TRGV8A0A0C4DH27 118 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 hCG_38984A0A1B0GV85 526 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 OR6C65A6NJZ3 312 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 PRRG2O14669 202 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 GATBO75879 557 aaKnown RBP7.55□□□□□ -1.2
RIF1-208ENST00000457745 MAS1P04201 325 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 ISG15P05161 165 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 OCM2P0CE71 109 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 FAHP16930 419 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 GRNP28799 593 aaKnown RBP7.55□□□□□ -1.2
RIF1-208ENST00000457745 CALCRP30988 508 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 PTGER4P35408 488 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 PEX19P40855 299 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 CA7P43166 264 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 SLC6A9P48067 706 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 IDH3GP51553 393 aaPredicted RBP7.55□□□□□ -1.2
RIF1-208ENST00000457745 IFITM3Q01628 133 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 SPOCK1Q08629 439 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 MRPL28Q13084 256 aaKnown RBP7.55□□□□□ -1.2
RIF1-208ENST00000457745 HLXQ14774 488 aaPredicted RBP7.55□□□□□ -1.2
RIF1-208ENST00000457745 ALKBH6Q3KRA9 238 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 ZNF404Q494X3 552 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 HSD17B12Q53GQ0 312 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 ZNF529Q6P280 563 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 SFXN4Q6P4A7 337 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 Q6ZSR3 168 aa7.55□□□□□ -1.2
RIF1-208ENST00000457745 BHLHA15Q7RTS1 189 aaPredicted RBP7.55□□□□□ -1.2
RIF1-208ENST00000457745 ABHD12BQ7Z5M8 362 aaPredicted RBP7.55□□□□□ -1.2
RIF1-208ENST00000457745 EGFL6Q8IUX8 553 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms