RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CLDN1O95832 211 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 ISG15P05161 165 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 UBCP0CG48 685 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 CD53P19397 219 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 NR4A1P22736 598 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 LIPAP38571 399 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 RPL5P46777 297 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 NKX6-1P78426 367 aaPredicted RBP14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 SSX1Q16384 188 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 TSTQ16762 297 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 LIPKQ5VXJ0 399 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 UNQ6126/PRO20091Q6UXV3 157 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 ZNF704Q6ZNC4 412 aaPredicted RBP14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 C1orf174Q8IYL3 243 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 ABHD4Q8TB40 342 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 SPSB4Q96A44 273 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 PDCD1LG2Q9BQ51 273 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 BCL2L14Q9BZR8 327 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 RGCCQ9H4X1 137 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 ZNF391Q9UJN7 358 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 STARD10Q9Y365 291 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 N6AMT1Q9Y5N5 214 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 USP9YO00507 2555 aaPredicted RBP14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 PNMA8CA0A1B0GUJ8 204 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 CCRL2O00421 344 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 TBX1O43435 398 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 XRCC2O43543 280 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 GPRIN2O60269 458 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 FAM157BP0CG42 384 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 CCL1P22362 96 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 TUBG1P23258 451 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 RAD52P43351 418 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 SLC3A1Q07837 685 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 GLYATL3Q5SZD4 288 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 MEX3BQ6ZN04 569 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 NUP37Q8NFH4 326 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 OR13F1Q8NGS4 319 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 OR5AK2Q8NH90 309 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 GHSRQ92847 366 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 SGK3Q96BR1 496 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 RADILQ96JH8 1075 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 TMEM204Q9BSN7 226 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 TUBG2Q9NRH3 451 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 NDUFB11Q9NX14 153 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 SF3B6Q9Y3B4 125 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 SPEF1Q9Y4P9 236 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 ABCA4P78363 2273 aa14.3□□□□□ -0.12
CCDC90B-202ENST00000455220 A0A1B0GTI1 187 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 PPP1CBP62140 327 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 DAZAP2Q15038 168 aaPredicted RBP14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 TMEM244Q5VVB8 128 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 Q6ZSR3 168 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 ZNF676Q8N7Q3 588 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 OR5L1Q8NGL2 311 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 OR2AE1Q8NHA4 323 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 OR51E1Q8TCB6 317 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 RGP1Q92546 391 aaPredicted RBP14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 LYZL4Q96KX0 146 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 COMMD4Q9H0A8 199 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 POFUT1Q9H488 388 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 ZNF281Q9Y2X9 895 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 ICE1Q9Y2F5 2266 aa14.29□□□□□ -0.12
CCDC90B-202ENST00000455220 PKDREJQ9NTG1 2253 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 ROS1P08922 2347 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 LOC107986453A0A1B0GWG9 222 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 SHISA9B4DS77 424 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 P2RY10O00398 339 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 CD3EP07766 207 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 ACHEP22303 614 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 GABRA5P31644 462 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 GLRXP35754 106 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 TGFBR2P37173 567 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 RPS11P62280 158 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 ZNF92Q03936 586 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 MALLQ13021 153 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 SNTB2Q13425 540 aaKnown RBP14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 BLMHQ13867 455 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 ODF4Q2M2E3 257 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 FBXW12Q6X9E4 464 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 RDH10Q8IZV5 341 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 PLPP7Q8NBV4 271 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 OR1J1Q8NGS3 322 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 AKAP1Q92667 903 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 TMIGD2Q96BF3 282 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 REEP6Q96HR9 211 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 REPIN1Q9BWE0 567 aaKnown RBP14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 OR51B6Q9H340 312 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 OPA3Q9H6K4 179 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 GPR84Q9NQS5 396 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 KCNN3Q9UGI6 736 aa14.28□□□□□ -0.12
CCDC90B-202ENST00000455220 LOC390937A0A1W2PQ73 354 aa14.27□□□□□ -0.12
CCDC90B-202ENST00000455220 H3BSA7 217 aa14.27□□□□□ -0.12
CCDC90B-202ENST00000455220 GOSR1O95249 250 aa14.27□□□□□ -0.12
CCDC90B-202ENST00000455220 ATE1O95260 518 aa14.27□□□□□ -0.12
CCDC90B-202ENST00000455220 CFL1P23528 166 aaKnown RBP14.27□□□□□ -0.12
CCDC90B-202ENST00000455220 GK2Q14410 553 aaPredicted RBP14.27□□□□□ -0.12
CCDC90B-202ENST00000455220 YIF1BQ5BJH7 314 aa14.27□□□□□ -0.12
CCDC90B-202ENST00000455220 ADAM5Q6NVV9 412 aa14.27□□□□□ -0.12
CCDC90B-202ENST00000455220 SLC22A25Q6T423 547 aa14.27□□□□□ -0.12
CCDC90B-202ENST00000455220 MS4A15Q8N5U1 240 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms