RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 RABL2BQ9UNT1 228 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 C5orf63A6NC05 138 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 HTR5AP47898 357 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 MEOX1P50221 254 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 PPIAP62937 165 aaKnown RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 DYRK1AQ13627 763 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 ELFN2Q5R3F8 820 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 ZNF774Q6NX45 483 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 TMEM123Q8N131 208 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 MEIOBQ8N635 442 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 SUMF1Q8NBK3 374 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 C7orf50Q9BRJ6 194 aaKnown RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 CHIAQ9BZP6 476 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 ZNHIT1O43257 154 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 LSM6P62312 80 aaKnown RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 SLC22A6Q4U2R8 563 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 SFRP5Q5T4F7 317 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 ZNF813Q6ZN06 617 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 OR2AE1Q8NHA4 323 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 FNDC9Q8TBE3 224 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 CPNE4Q96A23 557 aaPredicted RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 MOB1AQ9H8S9 216 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 NOX3Q9HBY0 568 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 MYO7BQ6PIF6 2116 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 ERCC1P07992 297 aaPredicted RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 CD46P15529 392 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 FAHP16930 419 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 ANOS1P23352 680 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 FOXO1Q12778 655 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 SRSF6Q13247 344 aaKnown RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 ENDOGQ14249 297 aaKnown RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 NOXA1Q86UR1 476 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 TMEM251Q8N6I4 163 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 TMEM54Q969K7 222 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 FOXRED1Q96CU9 486 aaPredicted RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 SF3B5Q9BWJ5 86 aaKnown RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 BANF2Q9H503 90 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 MOV10Q9HCE1 1003 aaKnown RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 ELF5Q9UKW6 265 aaPredicted RBP12.03□□□□□ -0.48
CLK3-203ENST00000454830 CUL9Q8IWT3 2517 aa12.03□□□□□ -0.48
CLK3-203ENST00000454830 A0A096LPE4 126 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 A0A1W2PPZ6 126 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 NKX2-8O15522 239 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 YES1P07947 543 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 FSTP19883 344 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 BTG1P62324 171 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 HIST3H3Q16695 136 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 SCGB2B2Q4G0G5 96 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 BTN2A1Q7KYR7 527 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 OR56B4Q8NH76 319 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 FBXO17Q96EF6 278 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 ZNF69Q9UC07 566 aa12.02□□□□□ -0.48
CLK3-203ENST00000454830 TMEM127O75204 238 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 ZNF32P17041 273 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 IGFBP3P17936 291 aaPredicted RBP12.02□□□□□ -0.49
CLK3-203ENST00000454830 LINC00303Q3SY05 128 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 MOGAT2Q3SYC2 334 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 GLIPR1L1Q6UWM5 242 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 DOK3Q7L591 496 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 ARMC10Q8N2F6 343 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 PIGTQ969N2 578 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 FOXB1Q99853 325 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 GINS4Q9BRT9 223 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 PLSCR3Q9NRY6 295 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 MCTS1Q9ULC4 181 aaKnown RBP12.02□□□□□ -0.49
CLK3-203ENST00000454830 ING4Q9UNL4 249 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 MRPS28Q9Y2Q9 187 aaKnown RBP12.02□□□□□ -0.49
CLK3-203ENST00000454830 KLRC4-KLRK1H3BQV0 150 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 FARS2O95363 451 aaKnown RBP12.02□□□□□ -0.49
CLK3-203ENST00000454830 NTF4P34130 210 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 SNRPD2P62316 118 aaKnown RBP12.02□□□□□ -0.49
CLK3-203ENST00000454830 CSRP2Q16527 193 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 ZNF239Q16600 458 aaKnown RBP12.02□□□□□ -0.49
CLK3-203ENST00000454830 NKPD1Q17RQ9 610 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 C20orf196Q8IYI0 205 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 INTS12Q96CB8 462 aaKnown RBP12.02□□□□□ -0.49
CLK3-203ENST00000454830 IP6K3Q96PC2 410 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 SEC22CQ9BRL7 303 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 SELENOIQ9C0D9 397 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 ZNF703Q9H7S9 590 aaPredicted RBP12.02□□□□□ -0.49
CLK3-203ENST00000454830 UPB1Q9UBR1 384 aa12.02□□□□□ -0.49
CLK3-203ENST00000454830 A0A1B0GTI1 187 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 M0QYG6 137 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 CRTAPO75718 401 aaPredicted RBP12.01□□□□□ -0.49
CLK3-203ENST00000454830 CYB5AP00167 134 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 CD3DP04234 171 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 TRAPPC2P0DI81 140 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 TRAPPC2BP0DI82 140 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 ANXA7P20073 488 aaKnown RBP12.01□□□□□ -0.49
CLK3-203ENST00000454830 POU4F3Q15319 338 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 RNF144BQ7Z419 303 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 OR4C16Q8NGL9 310 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 PIGLQ9Y2B2 252 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 KLF13Q9Y2Y9 288 aaPredicted RBP12.01□□□□□ -0.49
CLK3-203ENST00000454830 ANKRD20A5PA0PJZ0 165 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 PEX14O75381 377 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 C10orf128Q5T292 105 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 Q6ZTK2 550 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 PNLDC1Q8NA58 520 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms