RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 GFOD2Q3B7J2 385 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZBED5Q49AG3 693 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PLA1AQ53H76 456 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 WDR38Q5JTN6 314 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GLYATL3Q5SZD4 288 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF362Q5T0B9 420 aaPredicted RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZBTB37Q5TC79 503 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SLC18B1Q6NT16 456 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CGB2Q6NT52 195 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 C11orf87Q6NUJ2 197 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SMARCD3Q6STE5 483 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 C1orf122Q6ZSJ8 110 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MBOAT2Q6ZWT7 520 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 BTN2A1Q7KYR7 527 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SYT9Q86SS6 491 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CROCCP2Q86T23 111 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LDLRAD3Q86YD5 345 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 C1orf87Q8N0U7 546 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LINC00471Q8N535 108 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CYB561A3Q8NBI2 242 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SDR9C7Q8NEX9 313 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SLC26A10Q8NG04 563 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR8J3Q8NGG0 315 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR56B2PQ8NGI1 322 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR51L1Q8NGJ5 315 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR4K13Q8NH42 304 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR52J3Q8NH60 311 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PPP1R35Q8TAP8 253 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 Q8TCH9 128 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SLC7A13Q8TCU3 470 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SPRYD4Q8WW59 207 aaPredicted RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ACOT11Q8WXI4 607 aaPredicted RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LZICQ8WZA0 190 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 DYRK2Q92630 601 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RORBQ92753 470 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PTP4A1Q93096 173 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MAP6Q96JE9 813 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ATP6V1G3Q96LB4 118 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NMNAT3Q96T66 252 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CCL13Q99616 98 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PITX2Q99697 317 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 COQ7Q99807 217 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ATF6BQ99941 703 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HCAR1Q9BXC0 346 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 POLR2J2Q9GZM3 115 aaKnown RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 POLR2J3Q9H1A7 115 aaKnown RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PPA2Q9H2U2 334 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PRDM13Q9H4Q3 707 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FN3KRPQ9HA64 309 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NOX4Q9NPH5 578 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TMEM100Q9NV29 134 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 INTS9Q9NV88 658 aaKnown RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ARGLU1Q9NWB6 273 aaPredicted RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CMTM6Q9NX76 183 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNRD1Q9P1U0 126 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 KIF17Q9P2E2 1029 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 VPREB3Q9UKI3 123 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SIGLEC7Q9Y286 467 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 POMT1Q9Y6A1 747 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RYR2Q92736 4967 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 A0A1B0GUS0 222 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 A0A1B0GWJ7 208 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OOEPA6NGQ2 149 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CD300LBA8K4G0 201 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RNASEK-C17orf49H0YIS7 233 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 M0R135 149 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CXCR6O00574 342 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NME4O00746 187 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ACOT8O14734 319 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CHST1O43916 411 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 EDF1O60869 148 aaKnown RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CLPXO76031 633 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ALX3O95076 343 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NDUFB2O95178 105 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HLA-DQA2P01906 255 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 VIMP08670 466 aaKnown RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HIST1H1CP16403 213 aaKnown RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GABRA5P31644 462 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GGT2P36268 569 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CD200P41217 278 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RGS6P49758 472 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SLC7A2P52569 658 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LSM6P62312 80 aaKnown RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HIST1H3AP68431 136 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LIPEQ05469 1076 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 KLF10Q13118 480 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF181Q2M3W8 571 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 KRTAP27-1Q3LI81 207 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IFI44LQ53G44 452 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OXLD1Q5BKU9 147 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SLC35F1Q5T1Q4 408 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HIST2H3PS2Q5TEC6 136 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 AGBL2Q5U5Z8 902 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ERICH5Q6P6B1 374 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HIST2H3AQ71DI3 136 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FKBP9P1Q75LS8 142 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PGAP1Q75T13 922 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ADCK1Q86TW2 530 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR6V1Q8N148 313 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms