RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 DEFB108BQ8NET1 73 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 OR10S1Q8NGN2 331 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 OR6K6Q8NGW6 343 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 OR11L1Q8NGX0 322 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 FAM216AQ8WUB2 273 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 ZNRF4Q8WWF5 429 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 ERGIC1Q969X5 290 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 CCDC124Q96CT7 223 aaKnown RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 ASB9Q96DX5 294 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 PLEKHA8Q96JA3 519 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 RBM4Q9BWF3 364 aaKnown RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 SSBP3Q9BWW4 388 aaPredicted RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 DGCR6LQ9BY27 220 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 SLC22A4Q9H015 551 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 NTN4Q9HB63 628 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 CENPMQ9NSP4 180 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 MIOXQ9UGB7 285 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 PRPF19Q9UMS4 504 aaKnown RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 INSIG2Q9Y5U4 225 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 COMMD3-BMI1R4GMX3 469 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 A0A1B0GWJ7 208 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 GGT3PA6NGU5 568 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 RIIAD1A6NNX1 92 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 RAP2AP10114 183 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 ZNF12P17014 697 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 ZNF3P17036 446 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 SPI1P17947 270 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 CA6P23280 308 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 BLVRAP53004 296 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 SLC25A1P53007 311 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 GNB2P62879 340 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 ZNF92Q03936 586 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 MAB21L1Q13394 359 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 GK3PQ14409 553 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 OR8G1Q15617 311 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 SNAI3Q3KNW1 292 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 DRAM2Q6UX65 266 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 BTNL3Q6UXE8 466 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 NLRC3Q7RTR2 1065 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 ZNF511Q8NB15 262 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 OR10G2Q8NGC3 310 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 OR4Q3Q8NH05 313 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 TEX47Q8TBZ9 253 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 GCDHQ92947 438 aaPredicted RBP10.81□□□□□ -0.68
CHD3-206ENST00000452447 SLAMF6Q96DU3 332 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 ARMC1Q9NVT9 282 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 VNN3Q9NY84 501 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 PPIAL4AQ9Y536 164 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 N6AMT1Q9Y5N5 214 aa10.81□□□□□ -0.68
CHD3-206ENST00000452447 CD300LBA8K4G0 201 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 H3BN98 237 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 ZNF593O00488 134 aaPredicted RBP10.8□□□□□ -0.68
CHD3-206ENST00000452447 GNGT2O14610 69 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 FSTL3O95633 263 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 CST1P01037 141 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 FSHBP01225 129 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 T-ENOLP0DO92 83 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 CLUP10909 449 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 OTX1P32242 354 aaPredicted RBP10.8□□□□□ -0.68
CHD3-206ENST00000452447 SLC15A1P46059 708 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 PRKXP51817 358 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 KLBQ86Z14 1044 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 OR8B3Q8NGG8 313 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 OR2AE1Q8NHA4 323 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 OTULINQ96BN8 352 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 NEIL1Q96FI4 390 aaPredicted RBP10.8□□□□□ -0.68
CHD3-206ENST00000452447 OR8B2Q96RD0 313 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 KCNJ15Q99712 375 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 TMEM246Q9BRR3 403 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 THTPAQ9BU02 230 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 NMNAT2Q9BZQ4 307 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 C1orf21Q9H246 121 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 UFSP2Q9NUQ7 469 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 NUP50Q9UKX7 468 aa10.8□□□□□ -0.68
CHD3-206ENST00000452447 ZNF878C9JN71 531 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 GMDSO60547 372 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 PMELP40967 661 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 CD200P41217 278 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 PCK2Q16822 640 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 ZNF404Q494X3 552 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 TEX30Q5JUR7 227 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 FAM201AQ5SY85 155 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 PRAMEF6Q5VXH4 476 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 LRRN1Q6UXK5 716 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 CD300LDQ6UXZ3 194 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 Q8TCH9 128 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 GIPC3Q8TF64 312 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 DVL3Q92997 716 aaPredicted RBP10.79□□□□□ -0.68
CHD3-206ENST00000452447 CLPTM1LQ96KA5 538 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 FEVQ99581 238 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 NIPSNAP1Q9BPW8 284 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 ADAT1Q9BUB4 502 aaKnown RBP10.79□□□□□ -0.68
CHD3-206ENST00000452447 CHID1Q9BWS9 393 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 FN3KRPQ9HA64 309 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 CMC2Q9NRP2 79 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 TAS2R1Q9NYW7 299 aa10.79□□□□□ -0.68
CHD3-206ENST00000452447 FAM20BO75063 409 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 SLC2A1P11166 492 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 PSKH1P11801 424 aa10.78□□□□□ -0.68
CHD3-206ENST00000452447 PAICSP22234 425 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms