RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TMEM236Q5W0B7 351 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 C1orf229Q6ZS94 237 aaPredicted RBP8.15□□□□□ -1.1
USP54-207ENST00000451492 AQP12AQ8IXF9 295 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 KLHL36Q8N4N3 616 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 SPICQ8N5J4 248 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 BOLLQ8N9W6 283 aaKnown RBP8.15□□□□□ -1.1
USP54-207ENST00000451492 SPATA3Q8NHX4 192 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 C22orf15Q8WYQ4 148 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 SIGLEC11Q96RL6 698 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 INTS14Q96SY0 518 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 SLC30A2Q9BRI3 323 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 TMPRSS13Q9BYE2 586 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 TTTY10Q9BZA0 68 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 ZNF556Q9HAH1 456 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 CMC2Q9NRP2 79 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 FAM53CQ9NYF3 392 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 POMPQ9Y244 141 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 PRR23D1E9PI22 279 aaPredicted RBP8.14□□□□□ -1.11
USP54-207ENST00000451492 TMEM178BH3BS89 294 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 SELENOFO60613 162 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 TIPRLO75663 272 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 PRR23D2P0DMB1 279 aaPredicted RBP8.14□□□□□ -1.11
USP54-207ENST00000451492 RPS2P15880 293 aaKnown RBP8.14□□□□□ -1.11
USP54-207ENST00000451492 EPHA1P21709 976 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 PAICSP22234 425 aaKnown RBP8.14□□□□□ -1.11
USP54-207ENST00000451492 GSTT1P30711 240 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 NAA10P41227 235 aaPredicted RBP8.14□□□□□ -1.11
USP54-207ENST00000451492 SLC25A1P53007 311 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 GINS1Q14691 196 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 TIGD6Q17RP2 521 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 SLC27A4Q6P1M0 643 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 PLBD1Q6P4A8 553 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 COLCA1Q6ZS62 124 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 DPY19L4Q7Z388 723 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 RFLNBQ8N5W9 214 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 BBS1Q8NFJ9 593 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 POP5Q969H6 163 aaKnown RBP8.14□□□□□ -1.11
USP54-207ENST00000451492 PLEKHA8Q96JA3 519 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 AMELYQ99218 206 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 NMNAT2Q9BZQ4 307 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 MMADHCQ9H3L0 296 aaPredicted RBP8.14□□□□□ -1.11
USP54-207ENST00000451492 C7orf69Q9H7B7 122 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 PATZ1Q9HBE1 687 aaKnown RBP8.14□□□□□ -1.11
USP54-207ENST00000451492 DDX28Q9NUL7 540 aaKnown RBP8.14□□□□□ -1.11
USP54-207ENST00000451492 ATRQ13535 2644 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 DOCK11Q5JSL3 2073 aa8.14□□□□□ -1.11
USP54-207ENST00000451492 WNK2Q9Y3S1 2297 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 TCRBV3S1A0A5B6 114 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 ARRDC5A6NEK1 342 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 CD300LBA8K4G0 201 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 CEACAM18A8MTB9 384 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 M0R129 80 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 FAM20BO75063 409 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 FOXH1O75593 365 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 GLCEO94923 617 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 MRPL3P09001 348 aaKnown RBP8.13□□□□□ -1.11
USP54-207ENST00000451492 H2BFMP0C1H6 154 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 OSMP13725 252 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 IRF2P14316 349 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 CD80P33681 288 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 MDH2P40926 338 aaKnown RBP8.13□□□□□ -1.11
USP54-207ENST00000451492 MAB21L1Q13394 359 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 MPPED2Q15777 294 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 TMEM155Q4W5P6 130 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 ESCO2Q56NI9 601 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 ARMCX4Q5H9R4 360 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 LINC01590Q5TEZ4 76 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 LIPNQ5VXI9 398 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 DRAM2Q6UX65 266 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 FAM57BQ71RH2 274 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 MUC20Q8N307 709 aaPredicted RBP8.13□□□□□ -1.11
USP54-207ENST00000451492 DEFB108BQ8NET1 73 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 OR56B2PQ8NGI1 322 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 THEM6Q8WUY1 208 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 KCNJ15Q99712 375 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 SLC6A7Q99884 636 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 ABHD6Q9BV23 337 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 CADM1Q9BY67 442 aaKnown RBP8.13□□□□□ -1.11
USP54-207ENST00000451492 YY1AP1Q9H869 796 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 MMP26Q9NRE1 261 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 OR5V1Q9UGF6 321 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 COL6A5A8TX70 2615 aa8.13□□□□□ -1.11
USP54-207ENST00000451492 IGHV3OR16-10A0A075B7F0 116 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 hCG_1807616A0A1W2PRN6 198 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 A6NLC8 198 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 LRRC30A6NM36 301 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 C3orf80F5H4A9 247 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 TRAPPC2LH3BP13 241 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 GSC2O15499 205 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 VENTXO95231 258 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 GRPP07492 148 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 LYNP07948 512 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 ANXA8P13928 327 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 OTX1P32242 354 aaPredicted RBP8.12□□□□□ -1.11
USP54-207ENST00000451492 PMELP40967 661 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 GNB2P62879 340 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 GRB2P62993 217 aaKnown RBP8.12□□□□□ -1.11
USP54-207ENST00000451492 GK3PQ14409 553 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 SFRP4Q6FHJ7 346 aaPredicted RBP8.12□□□□□ -1.11
USP54-207ENST00000451492 CD300LDQ6UXZ3 194 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms