RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ZNF878C9JN71 531 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 HAX1O00165 279 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 ACOT8O14734 319 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 GYG2O15488 501 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 CLUP10909 449 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 RPS2P15880 293 aaKnown RBP12.83□□□□□ -0.36
CHD3-205ENST00000449744 HOXB6P17509 224 aaKnown RBP12.83□□□□□ -0.36
CHD3-205ENST00000449744 CPT2P23786 658 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 GRK5P34947 590 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 SLC15A1P46059 708 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 SEC61A1P61619 476 aaKnown RBP12.83□□□□□ -0.36
CHD3-205ENST00000449744 OR8G1Q15617 311 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 ZNF181Q2M3W8 571 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 SNAI3Q3KNW1 292 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 DNAL1Q4LDG9 190 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 TEX30Q5JUR7 227 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 TRPM8Q7Z2W7 1104 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 BPIFB2Q8N4F0 458 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 CELF2-AS1Q8N7Q2 184 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 BCAS4Q8TDM0 211 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 CANT1Q8WVQ1 401 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 ERGIC1Q969X5 290 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 SUCNR1Q9BXA5 334 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 MMP26Q9NRE1 261 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 LRCH1Q9Y2L9 728 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 PPIAL4AQ9Y536 164 aa12.83□□□□□ -0.36
CHD3-205ENST00000449744 A0A1B0GWJ7 208 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 ARRDC5A6NEK1 342 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 A8MXK9 166 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 F5H0A9 414 aaPredicted RBP12.82□□□□□ -0.36
CHD3-205ENST00000449744 E2F6O75461 281 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 WNT2P09544 360 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 PSKH1P11801 424 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 PAICSP22234 425 aaKnown RBP12.82□□□□□ -0.36
CHD3-205ENST00000449744 CA6P23280 308 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 FPR2P25090 351 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 POU1F1P28069 291 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 HSD11B1P28845 292 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 OTX1P32242 354 aaPredicted RBP12.82□□□□□ -0.36
CHD3-205ENST00000449744 CD200P41217 278 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 GATA4P43694 442 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 ZNF92Q03936 586 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 MAB21L1Q13394 359 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 EIF2B1Q14232 305 aaKnown RBP12.82□□□□□ -0.36
CHD3-205ENST00000449744 PCK2Q16822 640 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 GLYATL3Q5SZD4 288 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 SPATC1Q76KD6 591 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 SPATA24Q86W54 205 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 IQCF1Q8N6M8 205 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.82□□□□□ -0.36
CHD3-205ENST00000449744 SEMA6DQ8NFY4 1073 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 OR6N2Q8NGY6 317 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 OR2AE1Q8NHA4 323 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 ZFAND2BQ8WV99 257 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 PLEKHA8Q96JA3 519 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 INTS14Q96SY0 518 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 MRI1Q9BV20 369 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 YY1AP1Q9H869 796 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 ZNF556Q9HAH1 456 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 TMEM165Q9HC07 324 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 PDP1Q9P0J1 537 aaPredicted RBP12.82□□□□□ -0.36
CHD3-205ENST00000449744 MIOXQ9UGB7 285 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 OPN4Q9UHM6 478 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 POLR3KQ9Y2Y1 108 aaPredicted RBP12.82□□□□□ -0.36
CHD3-205ENST00000449744 AUP1Q9Y679 476 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 WNK2Q9Y3S1 2297 aa12.82□□□□□ -0.36
CHD3-205ENST00000449744 FAM183AA6NL82 134 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 TRAPPC2LH3BP13 241 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 TRIM77I1YAP6 450 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 TBX1O43435 398 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 XRCC2O43543 280 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 GMDSO60547 372 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 SLC2A1P11166 492 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 ZNF12P17014 697 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 HILS1P60008 231 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 GNB2P62879 340 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 GRB2P62993 217 aaKnown RBP12.81□□□□□ -0.36
CHD3-205ENST00000449744 ZNF154Q13106 437 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 FLOT2Q14254 428 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 ARMCX4Q5H9R4 360 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 PRAMEF6Q5VXH4 476 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 USP43Q70EL4 1123 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 NLRC3Q7RTR2 1065 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 KLBQ86Z14 1044 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 ERI1Q8IV48 349 aaKnown RBP12.81□□□□□ -0.36
CHD3-205ENST00000449744 DEFB108BQ8NET1 73 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 OR8B3Q8NGG8 313 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 NEIL1Q96FI4 390 aaPredicted RBP12.81□□□□□ -0.36
CHD3-205ENST00000449744 OR8B2Q96RD0 313 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 SLC6A7Q99884 636 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 ADAT1Q9BUB4 502 aaKnown RBP12.81□□□□□ -0.36
CHD3-205ENST00000449744 SSBP3Q9BWW4 388 aaPredicted RBP12.81□□□□□ -0.36
CHD3-205ENST00000449744 OR51V1Q9H2C8 321 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 TOR3AQ9H497 397 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 OPA3Q9H6K4 179 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 SP140LQ9H930 580 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 MED20Q9H944 212 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 FN3KRPQ9HA64 309 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 UFSP2Q9NUQ7 469 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 INSIG2Q9Y5U4 225 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms