RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CRYAAP02489 173 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 ZNF35P13682 527 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 ACHEP22303 614 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 NR4A1P22736 598 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 CRYBB2P43320 205 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 FABP5Q01469 135 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 NAAAQ02083 359 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 ZNF101Q8IZC7 436 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 GPR148Q8TDV2 347 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 RGP1Q92546 391 aaPredicted RBP16.89■□□□□ 0.29
SGCE-207ENST00000447873 KCNS3Q9BQ31 491 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 CHCHD6Q9BRQ6 235 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 NAA50Q9GZZ1 169 aaKnown RBP16.89■□□□□ 0.29
SGCE-207ENST00000447873 OR51B6Q9H340 312 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 GPR84Q9NQS5 396 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 ENPP5Q9UJA9 477 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 HHLA2Q9UM44 414 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 SSR3Q9UNL2 185 aa16.89■□□□□ 0.29
SGCE-207ENST00000447873 ADGRG4Q8IZF6 3080 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 IGHV2OR16-5A0A0B4J2B6 119 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 A0A1B0GVI7 797 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 LOC107986453A0A1B0GWG9 222 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 SYT7O43581 403 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 NOL3O60936 208 aaKnown RBP16.88■□□□□ 0.29
SGCE-207ENST00000447873 RGS9O75916 674 aaPredicted RBP16.88■□□□□ 0.29
SGCE-207ENST00000447873 NGFP01138 241 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 RPS11P62280 158 aaKnown RBP eCLIP16.88■□□□□ 0.29
SGCE-207ENST00000447873 MALLQ13021 153 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 TMEM108Q6UXF1 575 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 UNQ6126/PRO20091Q6UXV3 157 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 OR51A4Q8NGJ6 313 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 OR5L1Q8NGL2 311 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 OR10AC1Q8NH08 325 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 OR2AE1Q8NHA4 323 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 SGK3Q96BR1 496 aa16.88■□□□□ 0.29
SGCE-207ENST00000447873 NPDC1Q9NQX5 325 aaPredicted RBP16.88■□□□□ 0.29
SGCE-207ENST00000447873 TRDV1A0A1B0GX56 115 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 A6NHS1 94 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 XRCC2O43543 280 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 ICMTO60725 284 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 GPX5O75715 221 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 ATE1O95260 518 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 OCM2P0CE71 109 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 FAM157BP0CG42 384 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 PTAFRP25105 342 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 CD40P25942 277 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 PCSK6P29122 969 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 TMBIM6P55061 237 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 UCP2P55851 309 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 LSM3P62310 102 aaKnown RBP16.87■□□□□ 0.29
SGCE-207ENST00000447873 INSL4Q14641 139 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 ACSM3Q53FZ2 586 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 GLYATL3Q5SZD4 288 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 CD200R1LQ6Q8B3 271 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 SLC16A12Q6ZSM3 486 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 RFPL4BQ6ZWI9 263 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 ZNF420Q8TAQ5 688 aaPredicted RBP16.87■□□□□ 0.29
SGCE-207ENST00000447873 RAB2BQ8WUD1 216 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 TSEN15Q8WW01 171 aaKnown RBP16.87■□□□□ 0.29
SGCE-207ENST00000447873 RPL3LQ92901 407 aaKnown RBP16.87■□□□□ 0.29
SGCE-207ENST00000447873 REEP6Q96HR9 211 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 RGCCQ9H4X1 137 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 ZNF391Q9UJN7 358 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 STARD10Q9Y365 291 aa16.87■□□□□ 0.29
SGCE-207ENST00000447873 ANKHD1Q8IWZ3 2542 aaKnown RBP16.87■□□□□ 0.29
SGCE-207ENST00000447873 A0A1B0GTI1 187 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 J3QW42 95 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 GABRPO00591 440 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 SMPD2O60906 423 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 GALP22466 123 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 CALCRP30988 508 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 RAD52P43351 418 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 Q499Y3 187 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 TMEM91Q6ZNR0 172 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 GDPGP1Q6ZNW5 385 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 DOK3Q7L591 496 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 CEACAM19Q7Z692 300 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 FAM71F1Q96KD3 344 aaPredicted RBP16.86■□□□□ 0.29
SGCE-207ENST00000447873 LYZL4Q96KX0 146 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 OR14A2Q96R54 314 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 RBM38Q9H0Z9 239 aaKnown RBP16.86■□□□□ 0.29
SGCE-207ENST00000447873 DHDHQ9UQ10 334 aa16.86■□□□□ 0.29
SGCE-207ENST00000447873 USP9XQ93008 2570 aaPredicted RBP16.86■□□□□ 0.29
SGCE-207ENST00000447873 WIPF3A6NGB9 483 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 ZNF879B4DU55 563 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 SC5DO75845 299 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 GABARAPO95166 117 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 IGLV3-1P01715 115 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 PEX19P40855 299 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 SOX2P48431 317 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 ZNF92Q03936 586 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 OR13C3Q8NGS6 347 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 AKAP1Q92667 903 aaKnown RBP eCLIP16.85■□□□□ 0.29
SGCE-207ENST00000447873 TRMT61AQ96FX7 289 aaKnown RBP16.85■□□□□ 0.29
SGCE-207ENST00000447873 DACH2Q96NX9 599 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 CENPOQ9BU64 300 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 FAM192AQ9GZU8 254 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 TXNL4BQ9NX01 149 aaKnown RBP16.85■□□□□ 0.29
SGCE-207ENST00000447873 TRBV5-5A0A0J9YX44 114 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 DPRXA6NFQ7 191 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms