RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 RNF128Q8TEB7 428 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 KXD1Q9BQD3 176 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 ATG101Q9BSB4 218 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 MBNL1Q9NR56 388 aaKnown RBP17.19■□□□□ 0.34
HMGA1-205ENST00000447654 KLK13Q9UKR3 277 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 KCNK6Q9Y257 313 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 MMP24Q9Y5R2 645 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 DFFBO76075 338 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 CCR4P51679 360 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 IL15RAQ13261 267 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 PDGFRLQ15198 375 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 ARHGAP11BQ3KRB8 267 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 HIKESHIQ53FT3 197 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 AGBL4Q5VU57 503 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 SLC16A9Q7RTY1 509 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF283Q8N7M2 679 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 SUMF2Q8NBJ7 301 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF385AQ96PM9 386 aaKnown RBP17.18■□□□□ 0.34
HMGA1-205ENST00000447654 HDAC8Q9BY41 377 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 MTIF3Q9H2K0 278 aaKnown RBP17.18■□□□□ 0.34
HMGA1-205ENST00000447654 RXFP3Q9NSD7 469 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 GPR34Q9UPC5 381 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 FBXO7Q9Y3I1 522 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 V9GYS6 101 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 MYO15AQ9UKN7 3530 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 LAMP2P13473 410 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 AK4P27144 223 aaPredicted RBP17.18■□□□□ 0.34
HMGA1-205ENST00000447654 AKT2P31751 481 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 ID4P47928 161 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 MRPS11P82912 194 aaKnown RBP17.18■□□□□ 0.34
HMGA1-205ENST00000447654 FHL1Q13642 323 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 CEBPEQ15744 281 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 SLC35A4Q96G79 324 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 NELFAQ9H3P2 528 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 OR1A2Q9Y585 309 aa17.18■□□□□ 0.34
HMGA1-205ENST00000447654 ABHD16AO95870 558 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 DBIP07108 87 aaKnown RBP17.17■□□□□ 0.34
HMGA1-205ENST00000447654 TRGC1P0CF51 173 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 AKR1C4P17516 323 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 PTNP21246 168 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 EPHA1P21709 976 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 RPS4Y1P22090 263 aaKnown RBP17.17■□□□□ 0.34
HMGA1-205ENST00000447654 DLK1P80370 383 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 CDK3Q00526 305 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 PMPCAQ10713 525 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 TMEM35AQ53FP2 167 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 TMPPEQ6ZT21 453 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 TMEM183AQ8IXX5 376 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF615Q8N8J6 731 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 FGF14Q92915 247 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 C5orf34Q96MH7 638 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 SLC26A1Q9H2B4 701 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 ADAP2Q9NPF8 381 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 PRDM7Q9NQW5 492 aa17.17■□□□□ 0.34
HMGA1-205ENST00000447654 CXCL1P09341 107 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 GNG10P50151 68 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 RPUSD3Q6P087 351 aaKnown RBP17.16■□□□□ 0.34
HMGA1-205ENST00000447654 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.16■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF676Q8N7Q3 588 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 POC1AQ8NBT0 407 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 ADAD2Q8NCV1 583 aaKnown RBP17.16■□□□□ 0.34
HMGA1-205ENST00000447654 NPEPL1Q8NDH3 523 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 RCBTB1Q8NDN9 531 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 METTL21AQ8WXB1 218 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 SHDQ96IW2 340 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 PCBD2Q9H0N5 130 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 NCOR1P1Q9H4R4 102 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 MRM2Q9UI43 246 aaKnown RBP17.16■□□□□ 0.34
HMGA1-205ENST00000447654 OR52A1Q9UKL2 312 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 GTF2A1LQ9UNN4 478 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 TLCD2A6NGC4 264 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 CEACAM18A8MTB9 384 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 TRDCB7Z8K6 153 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 ARPC3O15145 178 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 LATO43561 262 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 CLEC3AO75596 197 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 ERAL1O75616 437 aaKnown RBP17.16■□□□□ 0.34
HMGA1-205ENST00000447654 SFT2D2O95562 160 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 SSR2P43308 183 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 GLO1Q04760 184 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 PARM1Q6UWI2 310 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 HOGA1Q86XE5 327 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 OR51L1Q8NGJ5 315 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 AQP3Q92482 292 aa17.16■□□□□ 0.34
HMGA1-205ENST00000447654 CNRIP1Q96F85 164 aaPredicted RBP17.16■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF514Q96K75 400 aaPredicted RBP17.16■□□□□ 0.34
HMGA1-205ENST00000447654 TRGC2P03986 189 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 SLC35A1P78382 337 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 RAB35Q15286 201 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 ADAMTSL4Q6UY14 1074 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 DPY19L2P2Q6ZN68 376 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 ADGRE4PQ86SQ3 457 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 AMZ2Q86W34 360 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 EXD3Q8N9H8 876 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 MENTQ9BUN1 341 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 PRR32B1ATL7 298 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 PSMB5P28074 263 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 LSSP48449 732 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 AARDQ4LEZ3 155 aa17.15■□□□□ 0.34
HMGA1-205ENST00000447654 PDZD11Q5EBL8 140 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms