RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 LRBAP50851 2863 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 METTL15A6NJ78 407 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 C17orf100A8MU93 164 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 SSX4O60224 188 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 SULT1C4O75897 302 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 NAT2P11245 290 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 GABRB1P18505 474 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 KITLGP21583 273 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 AQP4P55087 323 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 PSG7Q13046 419 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 HLXQ14774 488 aaPredicted RBP12.07□□□□□ -0.48
SSBP3-208ENST00000444533 GFOD2Q3B7J2 385 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 FAM209AQ5JX71 171 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 IZUMO2Q6UXV1 221 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 NAA40Q86UY6 237 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 NRG4Q8WWG1 115 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 TFAP2CQ92754 450 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 SLC22A4Q9H015 551 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 CXXC4Q9H2H0 198 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 TPK1Q9H3S4 243 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 Q9H521 79 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 MYEF2Q9P2K5 600 aaKnown RBP12.07□□□□□ -0.48
SSBP3-208ENST00000444533 COPS3Q9UNS2 423 aa12.07□□□□□ -0.48
SSBP3-208ENST00000444533 CYSRT1A8MQ03 144 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 LOC110117498-PIK3R3F6TDL0 507 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 HAX1O00165 279 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 SPRY3O43610 288 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 MYL12AP19105 171 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 DDOSTP39656 456 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 CSNK2BP67870 215 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 GK2Q14410 553 aaPredicted RBP12.06□□□□□ -0.48
SSBP3-208ENST00000444533 CARTPTQ16568 116 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 MSMPQ1L6U9 139 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 SNAI3Q3KNW1 292 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 GLYATL3Q5SZD4 288 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 C6orf52Q5T4I8 152 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 BCL2L15Q5TBC7 163 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 OR2T2Q6IF00 324 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 OR5AS1Q8N127 324 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 OR13G1Q8NGZ3 307 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 CNIH3Q8TBE1 160 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 LGALS12Q96DT0 336 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 REEP6Q96HR9 211 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 SORCS2Q96PQ0 1159 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 RHNO1Q9BSD3 238 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 RASSF4Q9H2L5 321 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 AMBNQ9NP70 447 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 TMEM100Q9NV29 134 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 AASSQ9UDR5 926 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 GNG8Q9UK08 70 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 EXOGQ9Y2C4 368 aaKnown RBP12.06□□□□□ -0.48
SSBP3-208ENST00000444533 SNX5Q9Y5X3 404 aa12.06□□□□□ -0.48
SSBP3-208ENST00000444533 EFCAB10A6NFE3 127 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 ANKRD30BLA7E2S9 258 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 IQCF6A8MYZ5 107 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 MTRF1O75570 445 aaKnown RBP12.05□□□□□ -0.48
SSBP3-208ENST00000444533 RPP14O95059 124 aaKnown RBP12.05□□□□□ -0.48
SSBP3-208ENST00000444533 IGHV4-39P01824 125 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 PDLIM4P50479 330 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 MMP16P51512 607 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 ISL1P61371 349 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 ZNF92Q03936 586 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 MZT1Q08AG7 82 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 CLEC12BQ2HXU8 276 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 EGFL6Q8IUX8 553 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 ZNF540Q8NDQ6 660 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 BHLHE23Q8NDY6 225 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 OR8G5Q8NG78 346 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 OR2Z1Q8NG97 314 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 OR2AE1Q8NHA4 323 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 HAVCR2Q8TDQ0 301 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 ITFG2Q969R8 447 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 POFUT1Q9H488 388 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 SAP30LQ9HAJ7 183 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 SCN3BQ9NY72 215 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 NKIRAS2Q9NYR9 191 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 R4GMQ9 66 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 RTTNQ86VV8 2226 aa12.05□□□□□ -0.48
SSBP3-208ENST00000444533 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-208ENST00000444533 FAM20BO75063 409 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 WBP4O75554 376 aaKnown RBP12.04□□□□□ -0.48
SSBP3-208ENST00000444533 GNAO1P09471 354 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 DAOP14920 347 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 TNFRSF1AP19438 455 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 DCKP27707 260 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 GNALP38405 381 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 MMP15P51511 669 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 CCL8P80075 99 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 TNFAIP6P98066 277 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-208ENST00000444533 MRPL28Q13084 256 aaKnown RBP12.04□□□□□ -0.48
SSBP3-208ENST00000444533 CDK5R2Q13319 367 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 GALEQ14376 348 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 TSTQ16762 297 aaKnown RBP12.04□□□□□ -0.48
SSBP3-208ENST00000444533 TMPRSS11AQ6ZMR5 421 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 ZCCHC24Q8N2G6 241 aaKnown RBP12.04□□□□□ -0.48
SSBP3-208ENST00000444533 CSNK2A3Q8NEV1 391 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 UBASH3BQ8TF42 649 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 APH1BQ8WW43 257 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 FAM168AQ92567 244 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 ALG8Q9BVK2 526 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms