RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 FBXO6Q9NRD1 293 aaPredicted RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 TMEM9Q9P0T7 183 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 KLK11Q9UBX7 282 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 ING4Q9UNL4 249 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 FARSAQ9Y285 508 aaKnown RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 NTNG1Q9Y2I2 539 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 ACOT9Q9Y305 439 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 ATRXP46100 2492 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 NCOA3Q9Y6Q9 1424 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 EIF3AQ14152 1382 aaKnown RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 GLTPD2A6NH11 291 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 ZNF724A8MTY0 619 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 C21orf140B9A014 251 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 F5H5T6 163 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 SULT2B1O00204 365 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 BIRC5O15392 142 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 FKBP6O75344 327 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 GATBO75879 557 aaKnown RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 SNAPINO95295 136 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 DHFRP00374 187 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 IGHV2-5P01817 119 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 IFNA16P05015 189 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 OR8U9P0C7N5 309 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 LIMS3P0CW19 117 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 LIMS4P0CW20 117 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 CCDC166P0CW27 439 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 IDO1P14902 403 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 FUT3P21217 361 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 CCNE1P24864 410 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 HTR1FP30939 366 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 ARL2P36404 184 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 SOX3P41225 446 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 CDK9P50750 372 aaKnown RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 GPM6AP51674 278 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 HCCSP53701 268 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 TAS2R39P59534 338 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 TAS2R31P59538 309 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 PSME3P61289 254 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 RPS14P62263 151 aaKnown RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 RPS27AP62979 156 aaKnown RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 FAM3AP98173 230 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 ZNF154Q13106 437 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 LY6DQ14210 128 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 PTGES3Q15185 160 aaKnown RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 TRIP13Q15645 432 aaPredicted RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 ZIC1Q15915 447 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 CYP51A1Q16850 503 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 ECSCRQ19T08 205 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 CHRFAM7AQ494W8 412 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 SPIN4Q56A73 249 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 MEDAGQ5VYS4 303 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 MED27Q6P2C8 311 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 CD200R1LQ6Q8B3 271 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 WDR82Q6UXN9 313 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 Q6ZT83 130 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 FAM92BQ6ZTR7 304 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 CHMP1BQ7LBR1 199 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 S100A7AQ86SG5 101 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 MDS2Q8NDY4 140 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 PXT1Q8NFP0 134 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 OR8G5Q8NG78 346 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 OR8U1Q8NH10 309 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 SYNPRQ8TBG9 265 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 ADAMTS16Q8TE57 1224 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 OR5P2Q8WZ92 322 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 TLCD1Q96CP7 247 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 SMIM19Q96E16 107 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 ALKBH3Q96Q83 286 aaPredicted RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 PSMB7Q99436 277 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 GPR21Q99679 349 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 NIPSNAP1Q9BPW8 284 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 TMEM208Q9BTX3 173 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 ADGRL4Q9HBW9 690 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 ACOT13Q9NPJ3 140 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 DDX19AQ9NUU7 478 aaKnown RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 EHFQ9NZC4 300 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 ZNF107Q9UII5 783 aaPredicted RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 GNPTGQ9UJJ9 305 aa3.68□□□□□ -1.82
VPS50-206ENST00000443443 SAMD4AQ9UPU9 718 aaKnown RBP3.68□□□□□ -1.82
VPS50-206ENST00000443443 ARID2Q68CP9 1835 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CEMIPQ8WUJ3 1361 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 TNRQ92752 1358 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 IGLV3-10A0A075B6K4 115 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 KIR2DL5BA0A0G2JN68 375 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 KIR2DL5BA0A0G2JPC4 375 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 SMIM28A0A1B0GU29 152 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 A0A1B0GV72 72 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 ISPDA4D126 451 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 A8MXK9 166 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 EFCAB9A8MZ26 197 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 C2orf74A8MZ97 194 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 ANKRD63C9JTQ0 380 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 KCNK1O00180 336 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 KPNA3O00505 521 aaPredicted RBP3.67□□□□□ -1.82
VPS50-206ENST00000443443 CXCR6O00574 342 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 DCTN3O75935 186 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 CTDNEP1O95476 244 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 BCHEP06276 602 aa3.67□□□□□ -1.82
VPS50-206ENST00000443443 MELTFP08582 738 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms