RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 OR8G1Q15617 311 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 RABL3Q5HYI8 236 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 PTCHD4Q6ZW05 846 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 PGAP1Q75T13 922 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 NAA40Q86UY6 237 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 FGFRL1Q8N441 504 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 Q8N7P7 452 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 ACOT11Q8WXI4 607 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-208ENST00000443046 TNFRSF14Q92956 283 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 GPX7Q96SL4 187 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-208ENST00000443046 RPS6KA6Q9UK32 745 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 FOXJ3Q9UPW0 622 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 NOP16Q9Y3C1 178 aaKnown RBP11.79□□□□□ -0.52
HMGN1-208ENST00000443046 SNX13Q9Y5W8 968 aa11.79□□□□□ -0.52
HMGN1-208ENST00000443046 MEGF11A6BM72 1044 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 ANKRD61A6NGH8 418 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 DCTN6O00399 190 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 NPFFO15130 113 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 XPNPEP2O43895 674 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 KDELR2P33947 212 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 SELENOWP63302 87 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 GUCA2AQ02747 115 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 MEP1BQ16820 701 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 GPR139Q6DWJ6 353 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 PGM2L1Q6PCE3 622 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 CRIP3Q6Q6R5 217 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 CORO6Q6QEF8 472 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 TBPL2Q6SJ96 375 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 C1orf122Q6ZSJ8 110 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 MBOAT2Q6ZWT7 520 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 BOLLQ8N9W6 283 aaKnown RBP11.78□□□□□ -0.52
HMGN1-208ENST00000443046 OR8J3Q8NGG0 315 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 SPRYD4Q8WW59 207 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-208ENST00000443046 PPA2Q9H2U2 334 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 PNRC2Q9NPJ4 139 aaKnown RBP11.78□□□□□ -0.52
HMGN1-208ENST00000443046 C1orf123Q9NWV4 160 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 RHCGQ9UBD6 479 aa11.78□□□□□ -0.52
HMGN1-208ENST00000443046 RYR2Q92736 4967 aa11.77□□□□□ -0.52
HMGN1-208ENST00000443046 IGLV1-36A0A0B4J1U3 117 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 A0A1B0GW55 424 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 CD300LBA8K4G0 201 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 J3KTA2 159 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 TXNDC12O95881 172 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 DUX4L2P0CJ85 424 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 DUX4L3P0CJ86 424 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 DUX4L4P0CJ87 422 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 DUX4L5P0CJ88 424 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 DUX4L6P0CJ89 424 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 DUX4L7P0CJ90 424 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 IFNA8P32881 189 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 CDKN2AP42771 156 aaKnown RBP11.77□□□□□ -0.53
HMGN1-208ENST00000443046 GPR4P46093 362 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 YAP1P46937 504 aaKnown RBP11.77□□□□□ -0.53
HMGN1-208ENST00000443046 FXYD6P3P58550 94 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 POU4F2Q12837 409 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 ECH1Q13011 328 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 MALLQ13021 153 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 CYLC2Q14093 348 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-208ENST00000443046 SLC18B1Q6NT16 456 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 ERICH5Q6P6B1 374 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 DUX4L9Q6RFH8 374 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-208ENST00000443046 CFAP77Q6ZQR2 320 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 ZNF826PQ6ZT77 177 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 ADCK1Q86TW2 530 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 C11orf44Q8N8P7 122 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 SPERTQ8NA61 448 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 ST8SIA4Q92187 359 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 TSSK2Q96PF2 358 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 SH3GL1Q99961 368 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 ADAT1Q9BUB4 502 aaKnown RBP11.77□□□□□ -0.53
HMGN1-208ENST00000443046 FNDC11Q9BVV2 318 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 RERGLQ9H628 205 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 TMBIM4Q9HC24 238 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 SIRT7Q9NRC8 400 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 DUX4Q9UBX2 424 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 POLR1DQ9Y2S0 133 aa11.77□□□□□ -0.53
HMGN1-208ENST00000443046 F5H5K5 113 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 LCATP04180 440 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 VSIG8P0DPA2 414 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 ANOS1P23352 680 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 EEF1B2P24534 225 aaKnown RBP11.76□□□□□ -0.53
HMGN1-208ENST00000443046 MDH1P40925 334 aaKnown RBP11.76□□□□□ -0.53
HMGN1-208ENST00000443046 DLX1P56177 255 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 ELF3P78545 371 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-208ENST00000443046 TRAP1Q12931 704 aaKnown RBP11.76□□□□□ -0.53
HMGN1-208ENST00000443046 ZNF730Q6ZMV8 503 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 TSEN54Q7Z6J9 526 aaKnown RBP11.76□□□□□ -0.53
HMGN1-208ENST00000443046 C11orf53Q8IXP5 236 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 KLHDC1Q8N7A1 406 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 BEND2Q8NDZ0 799 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 SLC26A10Q8NG04 563 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 C8orf46Q8TAG6 207 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 PHF21AQ96BD5 680 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 ITPKCQ96DU7 683 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 AJUBAQ96IF1 538 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 TPD52L3Q96J77 140 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 ATF6BQ99941 703 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 TOR3AQ9H497 397 aa11.76□□□□□ -0.53
HMGN1-208ENST00000443046 MRPL15Q9P015 296 aaKnown RBP11.76□□□□□ -0.53
HMGN1-208ENST00000443046 ONECUT1Q9UBC0 465 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms