RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 SPICQ8N5J4 248 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 ZNF420Q8TAQ5 688 aaPredicted RBP17.76■□□□□ 0.43
CDKN3-204ENST00000442975 KCNJ15Q99712 375 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 NTN4Q9HB63 628 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 DNAJC27Q9NZQ0 273 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 YLPM1P49750 1951 aaKnown RBP17.76■□□□□ 0.43
CDKN3-204ENST00000442975 A0A0G2JMP0 313 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 A0A0X1KG70 313 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 GGT3PA6NGU5 568 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 TBX1O43435 398 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 SELENOFO60613 162 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 PNPP00491 289 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 ANXA2P07355 339 aaKnown RBP17.75■□□□□ 0.43
CDKN3-204ENST00000442975 SLC15A1P46059 708 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 RAD23AP54725 363 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 GRB2P62993 217 aaKnown RBP17.75■□□□□ 0.43
CDKN3-204ENST00000442975 LCN2P80188 198 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 ZMYND11Q15326 602 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 BBS1Q8NFJ9 593 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 OR4M2Q8NGB6 313 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 DNAJC9Q8WXX5 260 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 SIGLEC11Q96RL6 698 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 ABHD6Q9BV23 337 aa17.75■□□□□ 0.43
CDKN3-204ENST00000442975 COL6A5A8TX70 2615 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 MXRA5Q9NR99 2828 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 CD300LBA8K4G0 201 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 ZNF205O95201 554 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 CYB5R3P00387 301 aaPredicted RBP17.74■□□□□ 0.43
CDKN3-204ENST00000442975 CA6P23280 308 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 NAA10P41227 235 aaPredicted RBP17.74■□□□□ 0.43
CDKN3-204ENST00000442975 CDK5Q00535 292 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 SRSF2Q01130 221 aaKnown RBP17.74■□□□□ 0.43
CDKN3-204ENST00000442975 OR8G1Q15617 311 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 ATP6AP1Q15904 470 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 CPOQ8IVL8 374 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 TIGD4Q8IY51 512 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 KLHL36Q8N4N3 616 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 UTP4Q969X6 686 aaKnown RBP17.74■□□□□ 0.43
CDKN3-204ENST00000442975 NRBF2Q96F24 287 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 AMELYQ99218 206 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 ADAT1Q9BUB4 502 aaKnown RBP17.74■□□□□ 0.43
CDKN3-204ENST00000442975 SLC25A19Q9HC21 320 aa17.74■□□□□ 0.43
CDKN3-204ENST00000442975 LRRC30A6NM36 301 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 TMEM178BH3BS89 294 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 PRODHO43272 600 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 CIB2O75838 187 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 MDH2P40926 338 aaKnown RBP17.73■□□□□ 0.43
CDKN3-204ENST00000442975 SNAPC1Q16533 368 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 GFOD2Q3B7J2 385 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 DCAF12L2Q5VW00 463 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 FAHD1Q6P587 224 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 SHFQ7M4L6 423 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 OR5K1Q8NHB7 308 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 RNF133Q8WVZ7 376 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 TMEM158Q8WZ71 300 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 DVL3Q92997 716 aaPredicted RBP17.73■□□□□ 0.43
CDKN3-204ENST00000442975 TOR3AQ9H497 397 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 METTL17Q9H7H0 456 aaPredicted RBP17.73■□□□□ 0.43
CDKN3-204ENST00000442975 G6PC2Q9NQR9 355 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 TVP23BQ9NYZ1 205 aa17.73■□□□□ 0.43
CDKN3-204ENST00000442975 IFNL4K9M1U5 179 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 H2BFMP0C1H6 154 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 IRF2P14316 349 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 TIGD6Q17RP2 521 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 TMEM155Q4W5P6 130 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 PRAMEF6Q5VXH4 476 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 FAM57BQ71RH2 274 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 OR56B2PQ8NGI1 322 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 REPIN1Q9BWE0 567 aaKnown RBP17.72■□□□□ 0.43
CDKN3-204ENST00000442975 MMADHCQ9H3L0 296 aaPredicted RBP17.72■□□□□ 0.43
CDKN3-204ENST00000442975 OPA3Q9H6K4 179 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 MARCH7Q9H992 704 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 BRD7Q9NPI1 651 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 KRT84Q9NSB2 600 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 NOP16Q9Y3C1 178 aaKnown RBP17.72■□□□□ 0.43
CDKN3-204ENST00000442975 AP4S1Q9Y587 144 aa17.72■□□□□ 0.43
CDKN3-204ENST00000442975 LOC105371242A0A075B767 164 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 XRCC2O43543 280 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 LYNP07948 512 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 FASP25445 335 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 OPRL1P41146 370 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 DAPP51397 102 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 CRISP1P54107 249 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 ZNF121P58317 390 aaPredicted RBP17.71■□□□□ 0.43
CDKN3-204ENST00000442975 APOFQ13790 326 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 LRRC28Q86X40 367 aaPredicted RBP17.71■□□□□ 0.43
CDKN3-204ENST00000442975 MUC20Q8N307 709 aaPredicted RBP17.71■□□□□ 0.43
CDKN3-204ENST00000442975 PARP8Q8N3A8 854 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 OTOSQ8NHW6 89 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 THEM6Q8WUY1 208 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 SLC22A4Q9H015 551 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 UFSP2Q9NUQ7 469 aa17.71■□□□□ 0.43
CDKN3-204ENST00000442975 A0A1B0GWJ7 208 aa17.7■□□□□ 0.42
CDKN3-204ENST00000442975 CEACAM18A8MTB9 384 aa17.7■□□□□ 0.42
CDKN3-204ENST00000442975 G3V2T6 193 aa17.7■□□□□ 0.42
CDKN3-204ENST00000442975 MITFO75030 526 aaPredicted RBP17.7■□□□□ 0.42
CDKN3-204ENST00000442975 FOXH1O75593 365 aa17.7■□□□□ 0.42
CDKN3-204ENST00000442975 THBS2P35442 1172 aa17.7■□□□□ 0.42
CDKN3-204ENST00000442975 MAB21L1Q13394 359 aa17.7■□□□□ 0.42
CDKN3-204ENST00000442975 SLC35D3Q5M8T2 416 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms