RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CLN6Q9NWW5 311 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 KLHDC2Q9Y2U9 406 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 LOC100130705A0A1B0GUX0 176 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 CASQ2O14958 399 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 SMAD7O15105 426 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 ANXA2P07355 339 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 TNFRSF1AP19438 455 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 USF1P22415 310 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 CFL1P23528 166 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 COL8A2P25067 703 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 HCCSP53701 268 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 ZNF121P58317 390 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 PSMA6P60900 246 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 ELF3P78545 371 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 ZNF92Q03936 586 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 CARTPTQ16568 116 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 TSTQ16762 297 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 GLYATL3Q5SZD4 288 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 LRRN1Q6UXK5 716 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 Q6ZR03 302 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 ZNF679Q8IYX0 411 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 OR51G2Q8NGK0 314 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 ITFG2Q969R8 447 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 ELMOD3Q96FG2 381 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 OR8B4Q96RC9 309 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 SLC30A2Q9BRI3 323 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 SLC22A4Q9H015 551 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 RGCCQ9H4X1 137 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 IL19Q9UHD0 177 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 ZNF391Q9UJN7 358 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 NOP16Q9Y3C1 178 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 LRP12Q9Y561 859 aa12.78□□□□□ -0.36
CSNK1E-210ENST00000442216 IGHV1-69-2A0A0G2JMI3 117 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 ERICH4A6NGS2 130 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF670-ZNF695F2Z2N8 137 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 DLGAP1O14490 977 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 TPD52L2O43399 206 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 RP2O75695 350 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 OR2T7P0C7T2 308 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 SLC2A1P11166 492 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 GABRB1P18505 474 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 DDOSTP39656 456 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 TNFAIP6P98066 277 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 EGR3Q06889 387 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 OR5AS1Q8N127 324 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF555Q8NEP9 628 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 OR2T27Q8NH04 317 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 YIPF5Q969M3 257 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 Q96MT0 163 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 BPESC1Q9GZL8 116 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 OR10A2Q9H208 303 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 TMEM100Q9NV29 134 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 DNAJC27Q9NZQ0 273 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 COPS3Q9UNS2 423 aa12.77□□□□□ -0.37
CSNK1E-210ENST00000442216 CD300LBA8K4G0 201 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 LYNX1G3V0Z9 82 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 TBX1O43435 398 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 TACSTD2P09758 323 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 LYNX1P0DP58 116 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 PEX2P28328 305 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 ATP6V1E1P36543 226 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 MTNR1AP48039 350 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 RIDAP52758 137 aaKnown RBP12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 CXCR4P61073 352 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 SLC3A1Q07837 685 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 SNCBQ16143 134 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 TIGD6Q17RP2 521 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 HFEQ30201 348 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF829Q3KNS6 432 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 OGFRL1Q5TC84 451 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 LPCAT4Q643R3 524 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF322Q6U7Q0 402 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 FAM57BQ71RH2 274 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 ENTHD1Q8IYW4 607 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 OR2Z1Q8NG97 314 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 OR2AE1Q8NHA4 323 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 RHOXF1Q8NHV9 184 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 SPRYD4Q8WW59 207 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 UBE2FQ969M7 185 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 SGK3Q96BR1 496 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 PGAM5Q96HS1 289 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 APOL4Q9BPW4 351 aa12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF275Q9NSD4 429 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 MRPL15Q9P015 296 aaKnown RBP12.76□□□□□ -0.37
CSNK1E-210ENST00000442216 C5orf63A6NC05 138 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 GGT3PA6NGU5 568 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 ENTPD6O75354 484 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 ABCA1O95477 2261 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 HEXAP06865 529 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 ANOS1P23352 680 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 GPR6P46095 362 aaPredicted RBP12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 SRP9P49458 86 aaKnown RBP12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 MMP16P51512 607 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 LRRC36Q1X8D7 754 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 TTC23Q5W5X9 447 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 CLEC9AQ6UXN8 241 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 KLBQ86Z14 1044 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 GALNT4Q8N4A0 578 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 CELF2-AS1Q8N7Q2 184 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms