RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 AK6Q9Y3D8 172 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ARL5AQ9Y689 179 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 DEPDC5O75140 1603 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 CFAP74Q9C0B2 1584 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 REREQ9P2R6 1566 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 SPEF2Q9C093 1822 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 FAM92AA1XBS5 289 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 H3BMQ9 156 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 K7EP13 123 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 BMPR1BO00238 502 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 PRKAB2O43741 272 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 TYROBPO43914 113 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 LMX1BO60663 402 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 RAD1O60671 282 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ALDOBP05062 364 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 HTR1AP08908 422 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 GTF2F2P13984 249 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 KITLGP21583 273 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 SLC6A1P30531 599 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ADORA1P30542 326 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 CHRNB4P30926 498 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ARR3P36575 388 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 GABRA4P48169 554 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 HMGCS1Q01581 520 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 MLLT11Q13015 90 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 NECTIN1Q15223 517 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 MPPED2Q15777 294 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 PGGHGQ32M88 737 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 TIGITQ495A1 244 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ACSBG2Q5FVE4 666 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR2B11Q5JQS5 317 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 MUC21Q5SSG8 566 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 FAM120AOSQ5T036 256 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 FAM219BQ5XKK7 198 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 FBXW9Q5XUX1 488 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR52E8Q6IFG1 317 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 PAQR6Q6TCH4 344 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMED4Q7Z7H5 227 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 IFT20Q8IY31 132 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR6V1Q8N148 313 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 INO80EQ8NBZ0 244 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 MDS2Q8NDY4 140 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM161BQ8NDZ6 487 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR6K3Q8NGY3 331 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 AENQ8WTP8 325 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 SSC4DQ8WTU2 575 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM234Q8WY98 164 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 NR4A3Q92570 626 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ISOC2Q96AB3 205 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 VCXQ9H320 206 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 WFDC1Q9HC57 220 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 IMPAD1Q9NX62 359 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 THAP10Q9P2Z0 257 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 MRPS28Q9Y2Q9 187 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 STYXL1Q9Y6J8 313 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 SCAPERQ9BY12 1400 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 DIP2AQ14689 1571 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF532Q9HCE3 1301 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ABCC1P33527 1531 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 MAP3K1Q13233 1512 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 UGGT2Q9NYU1 1516 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 K7EQG2 157 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 SLC16A4O15374 487 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 NTN1O95631 604 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 IFNA4P05014 189 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR8U9P0C7N5 309 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 SCGB1A1P11684 91 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 CSNK2A2P19784 350 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 IMPDH1P20839 514 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 ERP29P30040 261 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 RPL13AP40429 203 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 CRYBB2P43320 205 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 PRLHRP49683 370 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 IDH3GP51553 393 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 TAS2R39P59534 338 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 CYCSP99999 105 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 ACVR1Q04771 509 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 RIPPLY1Q0D2K3 151 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 C2orf80Q0P641 193 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 RAB40BQ12829 278 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 PTGES3Q15185 160 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 PSG5Q15238 335 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 TRAM1Q15629 374 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZIC1Q15915 447 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 CNPY1Q3B7I2 92 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 ADAMTSL4-AS1Q5T5F5 129 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 STPG1Q5TH74 334 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR8G2PQ6IF36 304 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 SPNS3Q6ZMD2 512 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 STPG2Q8N412 459 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR2T33Q8NG76 320 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR52H1Q8NGJ2 320 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 LYPD6BQ8NI32 183 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 UFD1Q92890 307 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 CPNE2Q96FN4 548 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 GMPPAQ96IJ6 420 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 VAT1Q99536 393 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 ECSITQ9BQ95 431 aa3.34□□□□□ -1.87
CDC42BPA-207ENST00000441725 SYT15Q9BQS2 421 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms