RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 LRTOMTQ8WZ04 291 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 TMEM186Q96B77 213 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 RAB39BQ96DA2 213 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 MEGF10Q96KG7 1140 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 AMELYQ99218 206 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 MARCH7Q9H992 704 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 HIF1ANQ9NWT6 349 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 TVP23BQ9NYZ1 205 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 NPTNQ9Y639 398 aa11.6□□□□□ -0.55
LTBR-202ENST00000440421 GGT3PA6NGU5 568 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 PRODHO43272 600 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 TBX1O43435 398 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 ANXA2P07355 339 aaKnown RBP11.59□□□□□ -0.55
LTBR-202ENST00000440421 HSD11B1P28845 292 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 NAA10P41227 235 aaPredicted RBP11.59□□□□□ -0.55
LTBR-202ENST00000440421 SLC15A1P46059 708 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 SRP9P49458 86 aaKnown RBP11.59□□□□□ -0.55
LTBR-202ENST00000440421 MMP16P51512 607 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 GRB2P62993 217 aaKnown RBP11.59□□□□□ -0.55
LTBR-202ENST00000440421 PTGES3Q15185 160 aaKnown RBP11.59□□□□□ -0.55
LTBR-202ENST00000440421 SNAPC1Q16533 368 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 SHFQ7M4L6 423 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 ZNF420Q8TAQ5 688 aaPredicted RBP11.59□□□□□ -0.55
LTBR-202ENST00000440421 THEM6Q8WUY1 208 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 MDFIQ99750 246 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 GCM1Q9NP62 436 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 KRT84Q9NSB2 600 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 DNAJC27Q9NZQ0 273 aa11.59□□□□□ -0.55
LTBR-202ENST00000440421 CD300LBA8K4G0 201 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 M0R129 80 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 PLPP2O43688 288 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 ZNF205O95201 554 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 IGHV2-70P01814 119 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 ANPEPP15144 967 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 CA6P23280 308 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 SRP14P37108 136 aaKnown RBP11.58□□□□□ -0.56
LTBR-202ENST00000440421 BTG1P62324 171 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 APOFQ13790 326 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 CCDC121Q6ZUS5 278 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 ASRGL1Q7L266 308 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 MOGAT3Q86VF5 341 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 ZDHHC13Q8IUH4 622 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 PARP8Q8N3A8 854 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 RNF133Q8WVZ7 376 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 DUS3LQ96G46 650 aaKnown RBP11.58□□□□□ -0.56
LTBR-202ENST00000440421 SIGLEC11Q96RL6 698 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 REPIN1Q9BWE0 567 aaKnown RBP11.58□□□□□ -0.56
LTBR-202ENST00000440421 SEMA6AQ9H2E6 1030 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 TOR3AQ9H497 397 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 BRD7Q9NPI1 651 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 PCDHB10Q9UN67 800 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 KLHDC2Q9Y2U9 406 aa11.58□□□□□ -0.56
LTBR-202ENST00000440421 TRAV20A0A0B4J274 112 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 TMEM178BH3BS89 294 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 PRKYO43930 277 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 CYB5R3P00387 301 aaPredicted RBP11.57□□□□□ -0.56
LTBR-202ENST00000440421 LYNP07948 512 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 H2BFMP0C1H6 154 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 FCGR1AP12314 374 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 PCMT1P22061 227 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 SLC2A5P22732 501 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 EPHA2P29317 976 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 HCCSP53701 268 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 RAD23AP54725 363 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 ZNF121P58317 390 aaPredicted RBP11.57□□□□□ -0.56
LTBR-202ENST00000440421 ESRRGP62508 458 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 ZMYND11Q15326 602 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 SLC35D3Q5M8T2 416 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 FAHD2BQ6P2I3 314 aaPredicted RBP11.57□□□□□ -0.56
LTBR-202ENST00000440421 FAM57BQ71RH2 274 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.57□□□□□ -0.56
LTBR-202ENST00000440421 OTOSQ8NHW6 89 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 PYDC1Q8WXC3 89 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 DVL3Q92997 716 aaPredicted RBP11.57□□□□□ -0.56
LTBR-202ENST00000440421 FAHD2AQ96GK7 314 aa11.57□□□□□ -0.56
LTBR-202ENST00000440421 A0A1B0GWJ7 208 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 SAC3D1A6NKF1 404 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 XRCC2O43543 280 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 MRPL3P09001 348 aaKnown RBP11.56□□□□□ -0.56
LTBR-202ENST00000440421 PMELP40967 661 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 OPRL1P41146 370 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 LCN2P80188 198 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 MAB21L1Q13394 359 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 OR8G1Q15617 311 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 TIGD6Q17RP2 521 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 GFOD2Q3B7J2 385 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 PRAMEF6Q5VXH4 476 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 KDM4DQ6B0I6 523 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 BCDIN3DQ7Z5W3 292 aaKnown RBP11.56□□□□□ -0.56
LTBR-202ENST00000440421 LRRC28Q86X40 367 aaPredicted RBP11.56□□□□□ -0.56
LTBR-202ENST00000440421 KLHL36Q8N4N3 616 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 SPICQ8N5J4 248 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 ZNF454Q8N9F8 522 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 OR56B2PQ8NGI1 322 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 SGK3Q96BR1 496 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 ADAT1Q9BUB4 502 aaKnown RBP11.56□□□□□ -0.56
LTBR-202ENST00000440421 PRRG3Q9BZD7 231 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 GABARAPL1Q9H0R8 117 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 UFSP2Q9NUQ7 469 aa11.56□□□□□ -0.56
LTBR-202ENST00000440421 CCDC182A6NF36 153 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms