RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 HSD11B1P28845 292 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 PRKXP51817 358 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 FLOT2Q14254 428 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 OR8G1Q15617 311 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 RSPO1Q2MKA7 263 aaPredicted RBP16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 LRRC28Q86X40 367 aaPredicted RBP16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 AQP12AQ8IXF9 295 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 ADGRG5Q8IZF4 528 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 OR11L1Q8NGX0 322 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 ZNRF4Q8WWF5 429 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 DDOQ99489 341 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 YY1AP1Q9H869 796 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 PDP1Q9P0J1 537 aaPredicted RBP16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 A0A0A6YYJ9 748 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 ZNF205O95201 554 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 SLC15A1P46059 708 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 EIF2B1Q14232 305 aaKnown RBP16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 SNAI3Q3KNW1 292 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 ARMCX4Q5H9R4 360 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 ERI1Q8IV48 349 aaKnown RBP16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 OR10S1Q8NGN2 331 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 OR6N2Q8NGY6 317 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 OR2AE1Q8NHA4 323 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 CANT1Q8WVQ1 401 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 INTS14Q96SY0 518 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 ADAT1Q9BUB4 502 aaKnown RBP16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 MRI1Q9BV20 369 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 SLC22A4Q9H015 551 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 CMC2Q9NRP2 79 aa16.7■□□□□ 0.26
SHROOM1-204ENST00000440118 ARRDC5A6NEK1 342 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 FAM183AA6NL82 134 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 CEACAM18A8MTB9 384 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 ACOT8O14734 319 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 TBX1O43435 398 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 AVPP01185 164 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 ANXA2P07355 339 aaKnown RBP16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 SLC2A1P11166 492 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 CA6P23280 308 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 GRK5P34947 590 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 GRB2P62993 217 aaKnown RBP16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 ZNF362Q5T0B9 420 aaPredicted RBP16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 NLRC3Q7RTR2 1065 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 JMJD8Q96S16 334 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 KCNJ15Q99712 375 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 TEX12Q9BXU0 123 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 MED20Q9H944 212 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 UFSP2Q9NUQ7 469 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 KIF17Q9P2E2 1029 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 LRCH1Q9Y2L9 728 aa16.69■□□□□ 0.26
SHROOM1-204ENST00000440118 CD300LBA8K4G0 201 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 PSKH1P11801 424 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 ZFP36P26651 326 aaKnown RBP16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 CX3CR1P49238 355 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 SEC61A1P61619 476 aaKnown RBP16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 ACTG1P63261 375 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 ZNF92Q03936 586 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 GLYATL3Q5SZD4 288 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 CD300LDQ6UXZ3 194 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 C1orf229Q6ZS94 237 aaPredicted RBP16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 PLEKHA8Q96JA3 519 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 SSBP3Q9BWW4 388 aaPredicted RBP16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 SUCNR1Q9BXA5 334 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 NMNAT2Q9BZQ4 307 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 OR51V1Q9H2C8 321 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 OPA3Q9H6K4 179 aa16.68■□□□□ 0.26
SHROOM1-204ENST00000440118 PPIAL4EA0A075B759 164 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 PPIAL4CA0A0B4J2A2 164 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 PPIAL4DF5H284 164 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 XRCC2O43543 280 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 VENTXO95231 258 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 PPIAL4FP0DN26 164 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 GSTT1P30711 240 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 GNB2P62879 340 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 TIGD6Q17RP2 521 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 ZNF181Q2M3W8 571 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 PRAMEF6Q5VXH4 476 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 CELF2-AS1Q8N7Q2 184 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 OR8B3Q8NGG8 313 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 ERGIC1Q969X5 290 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 OR8B2Q96RD0 313 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 SLC6A7Q99884 636 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 SP140LQ9H930 580 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 FN3KRPQ9HA64 309 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 MIOXQ9UGB7 285 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 PPIAL4AQ9Y536 164 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 AUP1Q9Y679 476 aa16.67■□□□□ 0.26
SHROOM1-204ENST00000440118 A6NLC8 198 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 PRR23D1E9PI22 279 aaPredicted RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 APOC1P02654 83 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 PRR23D2P0DMB1 279 aaPredicted RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 FPR2P25090 351 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 OTX1P32242 354 aaPredicted RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 CD200P41217 278 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 GATA4P43694 442 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 RPS7P62081 194 aaKnown RBP16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 MZT1Q08AG7 82 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 GINS1Q14691 196 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 GFOD2Q3B7J2 385 aa16.66■□□□□ 0.26
SHROOM1-204ENST00000440118 KLHL12Q53G59 568 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms