RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 NPSR1Q6W5P4 371 aa10.56□□□□□ -0.72
CCBE1-202ENST00000439986 GCNT2Q8N0V5 402 aa10.56□□□□□ -0.72
CCBE1-202ENST00000439986 C20orf85Q9H1P6 137 aa10.56□□□□□ -0.72
CCBE1-202ENST00000439986 NRIP3Q9NQ35 241 aa10.56□□□□□ -0.72
CCBE1-202ENST00000439986 FBXL2Q9UKC9 423 aa10.56□□□□□ -0.72
CCBE1-202ENST00000439986 CCL26Q9Y258 94 aa10.56□□□□□ -0.72
CCBE1-202ENST00000439986 SHROOM3Q8TF72 1996 aa10.56□□□□□ -0.72
CCBE1-202ENST00000439986 CLDN1O95832 211 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 EVX1P49640 407 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 P2RX1P51575 399 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 CLINT1Q14677 625 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 FAM78AQ5JUQ0 283 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 RSPO2Q6UXX9 243 aaPredicted RBP10.55□□□□□ -0.72
CCBE1-202ENST00000439986 GDF7Q7Z4P5 450 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 C19orf47Q8N9M1 422 aaKnown RBP10.55□□□□□ -0.72
CCBE1-202ENST00000439986 OR2T27Q8NH04 317 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 LINC01599Q8WXQ3 324 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 PIGTQ969N2 578 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TMEM18Q96B42 140 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 PRRT1Q99946 306 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 OR52A5Q9H2C5 316 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 ZNF286AQ9HBT8 521 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 ZNF281Q9Y2X9 895 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TK1P04183 234 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 CD80P33681 288 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 FOXK2Q01167 660 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 RBMS2Q15434 407 aaKnown RBP10.55□□□□□ -0.72
CCBE1-202ENST00000439986 NKAIN1Q4KMZ8 207 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 KIAA0907Q7Z7F0 614 aaPredicted RBP10.55□□□□□ -0.72
CCBE1-202ENST00000439986 DDOQ99489 341 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 DUSP23Q9BVJ7 150 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 MFRPQ9BY79 579 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 SLC25A31Q9H0C2 315 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 CHST8Q9H2A9 424 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 ZMAT3Q9HA38 289 aaKnown RBP10.55□□□□□ -0.72
CCBE1-202ENST00000439986 SCML1Q9UN30 329 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 OSGIN2Q9Y236 505 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 RAB29O14966 203 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 LALBAP00709 142 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TYMSP04818 313 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 SSR4P51571 173 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 OR1D5P58170 312 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TGFBR3Q03167 851 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 ALKBH6Q3KRA9 238 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 CENPVQ7Z7K6 275 aaPredicted RBP10.55□□□□□ -0.72
CCBE1-202ENST00000439986 RNF113BQ8IZP6 322 aaKnown RBP10.55□□□□□ -0.72
CCBE1-202ENST00000439986 RDH10Q8IZV5 341 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TRAF4Q9BUZ4 470 aaPredicted RBP10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TM7SF3Q9NS93 570 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TMEM82A0PJX8 343 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 MEGF11A6BM72 1044 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 HMGN4O00479 90 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TEAD1P28347 426 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 CAMK2BQ13554 666 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 ELFN2Q5R3F8 820 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 PRSS45Q7RTY3 260 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 FAM213BQ8TBF2 198 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 WBP2Q969T9 261 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TNFRSF13CQ96RJ3 184 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 DNMT3BQ9UBC3 853 aaKnown RBP10.55□□□□□ -0.72
CCBE1-202ENST00000439986 ZNF264O43296 627 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 DPM1O60762 260 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 RFX2P48378 723 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 PDZK1IP1Q13113 114 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 ZNF718Q3SXZ3 478 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 MARCH3Q86UD3 253 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 OR52E5Q8NH55 327 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 HAVCR2Q8TDQ0 301 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 RNF2Q99496 336 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 TRAPPC4Q9Y296 219 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 EMC9Q9Y3B6 208 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 MMP24Q9Y5R2 645 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 DMRT1Q9Y5R6 373 aa10.55□□□□□ -0.72
CCBE1-202ENST00000439986 MSTNO14793 375 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 ATP1B1P05026 303 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 GSTP1P09211 210 aaKnown RBP10.54□□□□□ -0.72
CCBE1-202ENST00000439986 UBBP0CG47 229 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 HMGA1P17096 107 aaKnown RBP10.54□□□□□ -0.72
CCBE1-202ENST00000439986 PLA1AQ53H76 456 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 TMEM244Q5VVB8 128 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 LIMS2Q7Z4I7 341 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 NKAIN4Q8IVV8 208 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 APH1BQ8WW43 257 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 ANKRD9Q96BM1 317 aaPredicted RBP10.54□□□□□ -0.72
CCBE1-202ENST00000439986 ZNF75AQ96N20 296 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 ZNF587Q96SQ5 575 aaPredicted RBP10.54□□□□□ -0.72
CCBE1-202ENST00000439986 NKX3-1Q99801 234 aaPredicted RBP10.54□□□□□ -0.72
CCBE1-202ENST00000439986 SEMA4GQ9NTN9 838 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 TRBV5-4A0A0C4DH59 114 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 CLEC18AA5D8T8 446 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 M0QYG6 137 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 F2RL1P55085 397 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 CLDN20P56880 219 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 CLEC18BQ6UXF7 455 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 AAED1Q7RTV5 226 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 CLEC18CQ8NCF0 446 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 PARP12Q9H0J9 701 aaKnown RBP10.54□□□□□ -0.72
CCBE1-202ENST00000439986 SIT1Q9Y3P8 196 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 PIGBOS1A0A0B4J2F0 54 aa10.54□□□□□ -0.72
CCBE1-202ENST00000439986 MARCH11A6NNE9 402 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms