RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 AWAT1Q58HT5 328 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 IL34Q6ZMJ4 242 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 ATG4DQ86TL0 474 aaPredicted RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 RTN4RL2Q86UN3 420 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 SLC22A24Q8N4F4 322 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 ZNF283Q8N7M2 679 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 TMEM104Q8NE00 496 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 TERB2Q8NHR7 220 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 OR51E1Q8TCB6 317 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 PMM1Q92871 262 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 TGM7Q96PF1 710 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 SPSB2Q99619 263 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 KLHDC3Q9BQ90 382 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 TMEM59Q9BXS4 323 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 GSN-AS1Q9NRJ2 163 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 KLF15Q9UIH9 416 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 MMP24Q9Y5R2 645 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 EFSO43281 561 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TNFSF12O43508 249 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 OR8U9P0C7N5 309 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 CRABP1P29762 137 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 GLP1RP43220 463 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 ASCL1P50553 236 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 SCAND1P57086 179 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TMEM128Q5BJH2 165 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 SLC25A24Q6NUK1 477 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 CLEC18BQ6UXF7 455 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 OR8U1Q8NH10 309 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 ARL5BQ96KC2 179 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 JSRP1Q96MG2 331 aaPredicted RBP8.1□□□□□ -1.11
COPB1-202ENST00000439561 RAB33BQ9H082 229 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 SLC17A5Q9NRA2 495 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 KCNK7Q9Y2U2 307 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 FRMPD3Q5JV73 1810 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 PLXNA2O75051 1894 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TRAV36DV7A0A075B6V5 113 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 LOC101059948A0A1B0GTJ6 334 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 MEX3AA1L020 520 aaKnown RBP8.1□□□□□ -1.11
COPB1-202ENST00000439561 UMAD1C9J7I0 102 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 H7C1Q1 480 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 XRCC2O43543 280 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 ZNF205O95201 554 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 DIRAS3O95661 229 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TNFP01375 233 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 MYOGP15173 224 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 RPL12P30050 165 aaKnown RBP8.1□□□□□ -1.11
COPB1-202ENST00000439561 CX3CR1P49238 355 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 DEFA6Q01524 100 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 KIAA0141Q14154 515 aaPredicted RBP8.1□□□□□ -1.11
COPB1-202ENST00000439561 USF2Q15853 346 aaPredicted RBP8.1□□□□□ -1.11
COPB1-202ENST00000439561 MIDNQ504T8 468 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 ZNF684Q5T5D7 378 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 P4HA3Q7Z4N8 544 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 ZNF561Q8N587 486 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 ZDHHC22Q8N966 263 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 FAM213BQ8TBF2 198 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 MAP3K3Q99759 626 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TCEAL7Q9BRU2 100 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 URM1Q9BTM9 101 aaKnown RBP8.1□□□□□ -1.11
COPB1-202ENST00000439561 GDE1Q9NZC3 331 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 RCC2Q9P258 522 aaKnown RBP8.1□□□□□ -1.11
COPB1-202ENST00000439561 FLVCR1Q9Y5Y0 555 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 R4GMQ9 66 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TMED7-TICAM2A0A0A6YYA0 188 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 A0A1B0GTI1 187 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 A0A1W2PP11 408 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 A0A1W2PPE2 198 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 CELA2BP08218 269 aaPredicted RBP8.1□□□□□ -1.11
COPB1-202ENST00000439561 GABRR1P24046 479 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 S100PP25815 95 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 AKT2P31751 481 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 PPICP45877 212 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 CAV2P51636 162 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 HTRA3P83110 453 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TLE3Q04726 772 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 EMC4Q5J8M3 183 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 DEFB119Q8N690 84 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TSLPQ969D9 159 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TM4SF19Q96DZ7 209 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 FOXQ1Q9C009 403 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.1□□□□□ -1.11
COPB1-202ENST00000439561 COPS7AQ9UBW8 275 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 TBX21Q9UL17 535 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 KPTNQ9Y664 436 aa8.1□□□□□ -1.11
COPB1-202ENST00000439561 BORCS7-ASMTA0A0B4J1R7 106 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 C7orf77A4D0Y5 90 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 SOCS1O15524 211 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 SMIM6P0DI80 62 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 SMIM10L1P0DMW3 83 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 HLA-DOBP13765 273 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 OMGP23515 440 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 NTSR1P30989 418 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 SNU13P55769 128 aaKnown RBP8.09□□□□□ -1.11
COPB1-202ENST00000439561 ACY1Q03154 408 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 TFF2Q03403 129 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 EGR4Q05215 589 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 NSDHLQ15738 373 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 MICBQ29980 383 aa8.09□□□□□ -1.11
COPB1-202ENST00000439561 C1orf189Q5VU69 101 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms