RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TMEM14AQ9Y6G1 99 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.86□□□□□ -0.99
MCF2L-216ENST00000439475 LRRC30A6NM36 301 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 CD300LBA8K4G0 201 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 TBX1O43435 398 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 MSMBP08118 114 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 SBK2P0C263 348 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 IGFBP5P24593 272 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 IL2RGP31785 369 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 CX3CR1P49238 355 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 ACTR3P61158 418 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 APOFQ13790 326 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 OR8G1Q15617 311 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 TIGD6Q17RP2 521 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 CR1LQ2VPA4 569 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 KDM4DQ6B0I6 523 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 SPATC1Q76KD6 591 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 SLC16A9Q7RTY1 509 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 KRT77Q7Z794 578 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 KLHL36Q8N4N3 616 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 SPICQ8N5J4 248 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 CELF2-AS1Q8N7Q2 184 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 OR11L1Q8NGX0 322 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 OTOSQ8NHW6 89 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 RNF133Q8WVZ7 376 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 PGAM5Q96HS1 289 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 MEGF10Q96KG7 1140 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 TEAD3Q99594 435 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 RBM4BQ9BQ04 359 aaKnown RBP8.86□□□□□ -0.99
MCF2L-216ENST00000439475 REPIN1Q9BWE0 567 aaKnown RBP8.86□□□□□ -0.99
MCF2L-216ENST00000439475 YIPF3Q9GZM5 350 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 GABARAPL1Q9H0R8 117 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 OR10A2Q9H208 303 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 SEMA6AQ9H2E6 1030 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 ZNF665Q9H7R5 613 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 LAMP5Q9UJQ1 280 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 ORC6Q9Y5N6 252 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 CACNG2Q9Y698 323 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 MALRD1Q5VYJ5 2156 aa8.86□□□□□ -0.99
MCF2L-216ENST00000439475 TRAV20A0A0B4J274 112 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 SLC22A31A6NKX4 558 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 ANKRD30BLA7E2S9 258 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 PHYHO14832 338 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 GMDSO60547 372 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 FOXH1O75593 365 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 SLC2A1P11166 492 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 SRD5A1P18405 259 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 CPT2P23786 658 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 SRP14P37108 136 aaKnown RBP8.85□□□□□ -0.99
MCF2L-216ENST00000439475 LMO4P61968 165 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 ZNF92Q03936 586 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 ZNF181Q2M3W8 571 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 SNAI3Q3KNW1 292 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 TMEM155Q4W5P6 130 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 GLYATL3Q5SZD4 288 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 FAM120AOSQ5T036 256 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 SLX4IPQ5VYV7 408 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 DEGS2Q6QHC5 323 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 MEPCEQ7L2J0 689 aaKnown RBP8.85□□□□□ -0.99
MCF2L-216ENST00000439475 KLBQ86Z14 1044 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 MUC20Q8N307 709 aaPredicted RBP8.85□□□□□ -0.99
MCF2L-216ENST00000439475 FTMTQ8N4E7 242 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 TCEANCQ8N8B7 351 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 PYDC1Q8WXC3 89 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 TMEM186Q96B77 213 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 MNTQ99583 582 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 SOX7Q9BT81 388 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 MROQ9BYG7 248 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 RGCCQ9H4X1 137 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 UBAP1Q9NZ09 502 aa8.85□□□□□ -0.99
MCF2L-216ENST00000439475 MRPL15Q9P015 296 aaKnown RBP8.85□□□□□ -0.99
MCF2L-216ENST00000439475 CELSR1Q9NYQ6 3014 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 ZAR1LA6NP61 321 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 FAM157AC9JC47 383 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 F5H5P2 479 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 H0YL77 283 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 TMEM178BH3BS89 294 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 WNT9BO14905 357 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 MLNRO43193 412 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 SELENOFO60613 162 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 MITFO75030 526 aaPredicted RBP8.84□□□□□ -0.99
MCF2L-216ENST00000439475 ZNF254O75437 659 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 HLA-DPB1P04440 258 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 PSKH1P11801 424 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 ALOX5APP20292 161 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 SLC2A5P22732 501 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 OPRL1P41146 370 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 CD200P41217 278 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 NAA10P41227 235 aaPredicted RBP8.84□□□□□ -0.99
MCF2L-216ENST00000439475 ZNF121P58317 390 aaPredicted RBP8.84□□□□□ -0.99
MCF2L-216ENST00000439475 BTG1P62324 171 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 KPNB1Q14974 876 aaKnown RBP8.84□□□□□ -0.99
MCF2L-216ENST00000439475 NXNL2Q5VZ03 156 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 FAM57BQ71RH2 274 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 LRRC28Q86X40 367 aaPredicted RBP8.84□□□□□ -0.99
MCF2L-216ENST00000439475 GID4Q8IVV7 300 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 PLPP7Q8NBV4 271 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 CSNK2A3Q8NEV1 391 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 OR10AD1Q8NGE0 317 aa8.84□□□□□ -0.99
MCF2L-216ENST00000439475 OR2AE1Q8NHA4 323 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms