RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CDC6Q99741 560 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 CMKLR1Q99788 373 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 TIMM29Q9BSF4 260 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 ELOVL3Q9HB03 270 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 RPS10P5Q9NQ39 176 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 OR2S2Q9NQN1 319 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 WIF1Q9Y5W5 379 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 TMEM14AQ9Y6G1 99 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 A0A0A6YYH2 397 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 A6NJ64 397 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 DBX1A6NMT0 343 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 HSPB2A8KAH6 182 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 GPR89AB7ZAQ6 455 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 LMO7DNF2Z398 122 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 MFNGO00587 321 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 AGPAT2O15120 278 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 F13BP05160 661 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 GPR89BP0CG08 455 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 ST6GAL1P15907 406 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 MPZP25189 248 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 CD80P33681 288 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 LPAR6P43657 344 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 CX3CR1P49238 355 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 HNRNPKP61978 463 aaKnown RBP eCLIP7.65□□□□□ -1.19
HPS4-206ENST00000439453 CYCSP99999 105 aaKnown RBP7.65□□□□□ -1.19
HPS4-206ENST00000439453 EIF2B1Q14232 305 aaKnown RBP7.65□□□□□ -1.19
HPS4-206ENST00000439453 HSPB2Q16082 182 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 ALG10Q5BKT4 473 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 OR52W1Q6IF63 320 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 FJX1Q86VR8 437 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 PPP1R14AQ96A00 147 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 ZNF587Q96SQ5 575 aaPredicted RBP7.65□□□□□ -1.19
HPS4-206ENST00000439453 INTS14Q96SY0 518 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 SULT4A1Q9BR01 284 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 PHPT1Q9NRX4 125 aaPredicted RBP7.65□□□□□ -1.19
HPS4-206ENST00000439453 TAS2R4Q9NYW5 299 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 CACFD1Q9UGQ2 172 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 DHDHQ9UQ10 334 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 KIF26BQ2KJY2 2108 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 BSNQ9UPA5 3926 aa7.65□□□□□ -1.19
HPS4-206ENST00000439453 IGKV1D-42A0A075B6H8 117 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 FBXO24O75426 580 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 IGHV2-5P01817 119 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 OR8U8P0C7N1 319 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 EIF2S3P41091 472 aaKnown RBP7.64□□□□□ -1.19
HPS4-206ENST00000439453 PSG6Q00889 435 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 TCEA2Q15560 299 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 DEFB133Q30KQ1 61 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 AWAT2Q6E213 333 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 FDX2Q6P4F2 183 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 DHRS11Q6UWP2 260 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 C3orf49Q96BT1 292 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 TM4SF19Q96DZ7 209 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 CKLFQ9UBR5 152 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 KCNG2Q9UJ96 466 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 HIF3AQ9Y2N7 669 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 CNOT1A5YKK6 2376 aaKnown RBP7.64□□□□□ -1.19
HPS4-206ENST00000439453 METTL21EPA6NDL7 271 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 LDLRAD4O15165 306 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 MED6O75586 246 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 FCGR3AP08637 254 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 NQO2P16083 231 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 PGDP52209 483 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 GPR18Q14330 331 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 SLC17A1Q14916 467 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 SGCAQ16586 387 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 KLHL26Q53HC5 615 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 PHF19Q5T6S3 580 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 OGFOD3Q6PK18 319 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 TRAPPC6BQ86SZ2 158 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 ACBD4Q8NC06 268 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 LMX1AQ8TE12 382 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 RNF128Q8TEB7 428 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 ROBO4Q8WZ75 1007 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 TMEM41AQ96HV5 264 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 RSRP1Q9BUV0 290 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 NUDT9Q9BW91 350 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 GRHPRQ9UBQ7 328 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 ALPK2Q86TB3 2170 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 MED19A0JLT2 244 aaPredicted RBP7.64□□□□□ -1.19
HPS4-206ENST00000439453 A6NLC8 198 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 PHYHO14832 338 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 NME2P22392 152 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 ACP1P24666 158 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 LSSP48449 732 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 ZNF141Q15928 474 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 MEP1BQ16820 701 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 MESTQ5EB52 335 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 OTPQ5XKR4 325 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 DGAT2L6Q6ZPD8 337 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 GVQW1Q8N7I0 195 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 WDSUB1Q8N9V3 476 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 LCN9Q8WX39 176 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 AQP3Q92482 292 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 HOXB13Q92826 284 aaPredicted RBP7.64□□□□□ -1.19
HPS4-206ENST00000439453 NKD1Q969G9 470 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 CTHRC1Q96CG8 243 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 KIRREL1Q96J84 757 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 AKR1E2Q96JD6 320 aa7.64□□□□□ -1.19
HPS4-206ENST00000439453 MOGAT1Q96PD6 335 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms