RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 SLC22A6Q4U2R8 563 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 C1orf189Q5VU69 101 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 OR52W1Q6IF63 320 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 ZNF529Q6P280 563 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 GUSBP11Q6P575 273 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 ADAT3Q96EY9 351 aaPredicted RBP14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 SEC22AQ96IW7 307 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 AIFM2Q9BRQ8 373 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 MED29Q9NX70 200 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 KLHL13Q9P2N7 655 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 PLEKHA6Q9Y2H5 1048 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 U3KQA8 63 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 EXPH5Q8NEV8 1989 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 FER1L5A0AVI2 2057 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 SULT2B1O00204 365 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 TOR1AO14656 332 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 TBPP20226 339 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 APOBEC1P41238 236 aaKnown RBP14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 STARP49675 285 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 GSK3AP49840 483 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 SUMO3P55854 103 aaPredicted RBP14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 RNF4P78317 190 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 SLC23A3Q6PIS1 610 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 ATRAIDQ6UW56 229 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 OR2W3Q7Z3T1 314 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 CHST4Q8NCG5 386 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 PLPP5Q8NEB5 264 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 C11orf40Q8WZ69 217 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 SLAMF6Q96DU3 332 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 PHB2Q99623 299 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 NUDT22Q9BRQ3 303 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 SMOC1Q9H4F8 434 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 CTSFQ9UBX1 484 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 OR2AT4A6NND4 320 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 YKT6O15498 198 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 SYT7O43581 403 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 CNR1P21554 472 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 HRH1P35367 487 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 GNALP38405 381 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 CASRP41180 1078 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 CLDN6P56747 220 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 TLE3Q04726 772 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 RABEPKQ7Z6M1 372 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 TMEM17Q86X19 198 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 OR10S1Q8NGN2 331 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 ZNF471Q9BX82 626 aaPredicted RBP14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 PBOV1Q9GZY1 135 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 PTGES2Q9H7Z7 377 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 SLC5A6Q9Y289 635 aa14.56□□□□□ -0.08
CLCNKA-203ENST00000439316 LOC100509620A0A075B734 347 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 TMEM14DPA8MWL7 114 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 ATP6V1G2-DDX39BF2Z307 99 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 ZNF208O43345 1280 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 SSX5O60225 188 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 APOC3P02656 99 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 FBXW4P57775 412 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 PPIAP62937 165 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 IL13RA1P78552 427 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 ATXN7L3Q14CW9 347 aaPredicted RBP14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 WDR74Q6RFH5 385 aaPredicted RBP14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 KLHL24Q6TFL4 600 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 C16orf47Q6ZP98 133 aaPredicted RBP14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 OR10H5Q8NGA6 315 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 FANCFQ9NPI8 374 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 IFT46Q9NQC8 304 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 ZC4H2Q9NQZ6 224 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 SEMA5BQ9P283 1151 aa14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 ATXN7L1Q9ULK2 861 aaPredicted RBP14.55□□□□□ -0.08
CLCNKA-203ENST00000439316 DNASE2O00115 360 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 EFSO43281 561 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 CER1O95813 267 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 GP1BAP07359 652 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 RAB3AP20336 220 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 EIF1AXP47813 144 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 PRKXP51817 358 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 C17orf67Q0P5P2 114 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 FOXF1Q12946 379 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 SNTB1Q13884 538 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 PAN3Q58A45 887 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 BEX5Q5H9J7 111 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 ADAD2Q8NCV1 583 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 OR10R2Q8NGX6 335 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 FBXW5Q969U6 566 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 DDIT4LQ96D03 193 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 C5orf34Q96MH7 638 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 FN3KRPQ9HA64 309 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 ALKBH4Q9NXW9 302 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 TAS2R3Q9NYW6 316 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 PISDQ9UG56 409 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 RALGAPA1Q6GYQ0 2036 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 IGHV3-20A0A0C4DH32 117 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 A0A1W2PNV4 684 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 C2orf72A6NCS6 295 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 LIPT2A6NK58 231 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 NUPL2O15504 423 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 ZNF354AO60765 605 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 DUS4LO95620 317 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 PNLIPP16233 465 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 GNB3P16520 340 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 ELP2Q6IA86 826 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms