RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 OR10A5Q9H207 317 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 C8orf33Q9H7E9 229 aaPredicted RBP12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SEC61A2Q9H9S3 476 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 A0A1W2PPH5 198 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 MED19A0JLT2 244 aaPredicted RBP12.09□□□□□ -0.47
PCNX3-202ENST00000439247 C1orf196B1AJZ1 125 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 DRD1P21728 446 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 OR2B8PP59922 312 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SLC18B1Q6NT16 456 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 BAHD1Q8TBE0 780 aaPredicted RBP12.09□□□□□ -0.47
PCNX3-202ENST00000439247 METTL21AQ8WXB1 218 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 FGGYQ96C11 551 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SLCO5A1Q9H2Y9 848 aa12.09□□□□□ -0.47
PCNX3-202ENST00000439247 ATXN7L1Q9ULK2 861 aaPredicted RBP12.09□□□□□ -0.47
PCNX3-202ENST00000439247 SEC16AO15027 2179 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 GNALP38405 381 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 RIDAP52758 137 aaKnown RBP12.08□□□□□ -0.48
PCNX3-202ENST00000439247 ANKRD55Q3KP44 614 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 OR2A2Q6IF42 318 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 ZNF600Q6ZNG1 722 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 COX15Q7KZN9 410 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 WDFY1Q8IWB7 410 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 FOXQ1Q9C009 403 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 NRSN2Q9GZP1 204 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 C5orf66Q9H5L9 145 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 SLC2A8Q9NY64 477 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 COA3Q9Y2R0 106 aaPredicted RBP12.08□□□□□ -0.48
PCNX3-202ENST00000439247 RHBDD3Q9Y3P4 386 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 TDRD6O60522 2096 aaKnown RBP12.08□□□□□ -0.48
PCNX3-202ENST00000439247 SMIM6P0DI80 62 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 C5AR1P21730 350 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 GPR3P46089 330 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 EIF1AXP47813 144 aaKnown RBP12.08□□□□□ -0.48
PCNX3-202ENST00000439247 FMODQ06828 376 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 BIKQ13323 160 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 IL34Q6ZMJ4 242 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 SKA3Q8IX90 412 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 ZDHHC22Q8N966 263 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 PNLDC1Q8NA58 520 aaKnown RBP12.08□□□□□ -0.48
PCNX3-202ENST00000439247 ADAMTS17Q8TE56 1095 aa12.08□□□□□ -0.48
PCNX3-202ENST00000439247 UBE2CO00762 179 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 CLN5O75503 358 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 HTR3BO95264 441 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 NUDT14O95848 222 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 ARG1P05089 322 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 HOXB5P09067 269 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 HLA-DOBP13765 273 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 FAM76BQ5HYJ3 339 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 NCMAPQ5T1S8 102 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 ZNF776Q68DI1 518 aaPredicted RBP12.07□□□□□ -0.48
PCNX3-202ENST00000439247 FDX2Q6P4F2 183 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 CLEC18BQ6UXF7 455 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 TAF8Q7Z7C8 310 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 AVL9Q8NBF6 648 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 MAFIPQ8WZ33 124 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 PDE7BQ9NP56 450 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 SMCO4Q9NRQ5 59 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 CLDN16Q9Y5I7 305 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 TRBV6-7A0A0A0MS04 114 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 A0A1W2PP11 408 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 PRSS37A4D1T9 235 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 ZNF217O75362 1048 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 CELA2BP08218 269 aaPredicted RBP12.07□□□□□ -0.48
PCNX3-202ENST00000439247 VSIG8P0DPA2 414 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 PNMTP11086 282 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 C5orf46Q6UWT4 87 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 OR4K15Q8NH41 348 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 SLC22A8Q8TCC7 542 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 MRGPRX1Q96LB2 322 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 DGAT2Q96PD7 388 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 ADOQ96SZ5 270 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 CENPMQ9NSP4 180 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 CACFD1Q9UGQ2 172 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 FRYLO94915 3013 aa12.07□□□□□ -0.48
PCNX3-202ENST00000439247 SDCBPO00560 298 aaPredicted RBP12.06□□□□□ -0.48
PCNX3-202ENST00000439247 FCGR3AP08637 254 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 ZNF14P17017 642 aaPredicted RBP12.06□□□□□ -0.48
PCNX3-202ENST00000439247 HAAOP46952 286 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 NAAAQ02083 359 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 SLC25A43Q8WUT9 341 aaPredicted RBP12.06□□□□□ -0.48
PCNX3-202ENST00000439247 KIRREL1Q96J84 757 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 SMIM8Q96KF7 97 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 NMES1Q9C002 83 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 SLC5A7Q9GZV3 580 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 CHRDQ9H2X0 955 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 TCEAL2Q9H3H9 227 aaPredicted RBP12.06□□□□□ -0.48
PCNX3-202ENST00000439247 METTL8Q9H825 291 aaKnown RBP12.06□□□□□ -0.48
PCNX3-202ENST00000439247 RNF122Q9H9V4 155 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 TAF9BQ9HBM6 251 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 HHLA2Q9UM44 414 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 AMDHD2Q9Y303 409 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 WDR87Q6ZQQ6 2873 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 A0A1B0GV50 99 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 TCRBV21S2A2A0A5A6 115 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 FAM157AC9JC47 383 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 OR8U8P0C7N1 319 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 IL11P20809 199 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 SUPT4H1P63272 117 aaKnown RBP12.06□□□□□ -0.48
PCNX3-202ENST00000439247 TOMM20Q15388 145 aa12.06□□□□□ -0.48
PCNX3-202ENST00000439247 C9orf152Q5JTZ5 239 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms