RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 RDH5Q92781 318 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 FBXO24O75426 580 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 GNB3P16520 340 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 EDDM3BP56851 147 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 FUT5Q11128 374 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 CCSO14618 274 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 RPA2P15927 270 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 ZXDAP98168 799 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 DMWDQ09019 674 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 MDGA2Q7Z553 956 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 GABRG1Q8N1C3 465 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 INTS12Q96CB8 462 aaKnown RBP11.02□□□□□ -0.65
TCOF1-205ENST00000439160 PCDHB10Q9UN67 800 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 ANGPTL7O43827 346 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 WNT11O96014 354 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 PI3P19957 117 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 NFYAP23511 347 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-205ENST00000439160 INSM1Q01101 510 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-205ENST00000439160 HAGHLQ6PII5 290 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-205ENST00000439160 SLC25A26Q70HW3 274 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 ADGRG3Q86Y34 549 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 OR10D3Q8NH80 312 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 MCHR2Q969V1 340 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 TSPAN15O95858 294 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 PATE4P0C8F1 98 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 PRKACAP17612 351 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 OMGP23515 440 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 ACAA2P42765 397 aaKnown RBP11.01□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF133P52736 654 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-205ENST00000439160 RAC1P63000 192 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 ACSM1Q08AH1 577 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 AKR1C8PQ5T2L2 129 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 MAMSTRQ6ZN01 415 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 MFSD4AQ8N468 514 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 POFUT1Q9H488 388 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 TMEM74BQ9NUR3 256 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 COPS3Q9UNS2 423 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF318Q5VUA4 2279 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 ICMTO60725 284 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 DDOSTP39656 456 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 FABP6P51161 128 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF766Q5HY98 468 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 SPATA46Q5T0L3 261 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 NPEPL1Q8NDH3 523 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 PTDSS2Q9BVG9 487 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 NELFAQ9H3P2 528 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 SAV1Q9H4B6 383 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-205ENST00000439160 HRASLSQ9HDD0 168 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 OR6C6A6NF89 314 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 SLC17A2O00624 439 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 GALNSP34059 522 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 MESTQ5EB52 335 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 PRSS35Q8N3Z0 413 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 GALNT16Q8N428 558 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF721Q8TF20 911 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 DDOQ99489 341 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 SCPEP1Q9HB40 452 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 NPAP1Q9NZP6 1156 aa11.01□□□□□ -0.65
TCOF1-205ENST00000439160 SPAARA0A1B0GVQ0 90 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 PHF1O43189 567 aaPredicted RBP11□□□□□ -0.65
TCOF1-205ENST00000439160 SSX4O60224 188 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 PMS2P2O95744 297 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 CCL3P10147 92 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 TPT1P13693 172 aaKnown RBP11□□□□□ -0.65
TCOF1-205ENST00000439160 ARR3P36575 388 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 BTG1P62324 171 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 GUCA2AQ02747 115 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 BTN1A1Q13410 526 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 CAMK2BQ13554 666 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
TCOF1-205ENST00000439160 RNF128Q8TEB7 428 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 ZC3H10Q96K80 434 aaKnown RBP11□□□□□ -0.65
TCOF1-205ENST00000439160 RGCCQ9H4X1 137 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 C12orf10Q9HB07 376 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 CYSLTR2Q9NS75 346 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 PTTG3PQ9NZH4 202 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF236Q9UL36 1845 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 TRAV17A0A0B4J275 112 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 A0A1W2PQD3 144 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 DEGS1O15121 323 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 AKR7A2O43488 359 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 ETV6P41212 452 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 MEOX1P50221 254 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 ZNF85Q03923 595 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 CDC20Q12834 499 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 OPCMLQ14982 345 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 ARSJQ5FYB0 599 aaPredicted RBP11□□□□□ -0.65
TCOF1-205ENST00000439160 EXD3Q8N9H8 876 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 TMEM185AQ8NFB2 350 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 SCARF2Q96GP6 870 aaPredicted RBP11□□□□□ -0.65
TCOF1-205ENST00000439160 RAB9BQ9NP90 201 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 PROCRQ9UNN8 238 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 FIGNL2A6NMB9 653 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 CSF2RBP32927 897 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 PRSS12P56730 875 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 RAB1AP62820 205 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 OR8G1Q15617 311 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 TMPRSS7Q7RTY8 843 aa11□□□□□ -0.65
TCOF1-205ENST00000439160 KCNJ15Q99712 375 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms