RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 UAP1Q16222 522 aaPredicted RBP8.52□□□□□ -1.05
RTN4-211ENST00000438462 LIN52Q52LA3 116 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 ZNF626Q68DY1 528 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 TSEN54Q7Z6J9 526 aaKnown RBP8.52□□□□□ -1.05
RTN4-211ENST00000438462 PLPP7Q8NBV4 271 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 OR5T2Q8NGG2 359 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 OR5J2Q8NH18 312 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 LRRC29Q8WV35 223 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 ARPC1AQ92747 370 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 GAFA1Q96PS6 74 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 GHITMQ9H3K2 345 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 MID1IP1Q9NPA3 183 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 C19orf12Q9NSK7 152 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 ZNF391Q9UJN7 358 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 SLC13A4Q9UKG4 626 aa8.52□□□□□ -1.05
RTN4-211ENST00000438462 J3QW42 95 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 RNF13O43567 381 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 OR6A2O95222 327 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 TFAP2AP05549 437 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 IGHV1-8P0DP01 117 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 CA6P23280 308 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 SLC9A3P48764 834 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 SERPINB8P50452 374 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 CAV3P56539 151 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 ZNF45Q02386 682 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 TRAP1Q12931 704 aaKnown RBP8.51□□□□□ -1.05
RTN4-211ENST00000438462 SNAPC1Q16533 368 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 RFTN2Q52LD8 501 aaPredicted RBP8.51□□□□□ -1.05
RTN4-211ENST00000438462 BLOC1S3Q6QNY0 202 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 PEX5LQ8IYB4 626 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 CLECL1Q8IZS7 167 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 CLIP4Q8N3C7 705 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 STPG2Q8N412 459 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 PCYOX1LQ8NBM8 494 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 OR5L1Q8NGL2 311 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 BBS10Q8TAM1 723 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 C12orf43Q96C57 262 aaKnown RBP8.51□□□□□ -1.05
RTN4-211ENST00000438462 TRNT1Q96Q11 434 aaKnown RBP8.51□□□□□ -1.05
RTN4-211ENST00000438462 SEPHS2Q99611 448 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 DESI2Q9BSY9 194 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 MRPL13Q9BYD1 178 aaKnown RBP8.51□□□□□ -1.05
RTN4-211ENST00000438462 MRPL46Q9H2W6 279 aaKnown RBP8.51□□□□□ -1.05
RTN4-211ENST00000438462 C12orf10Q9HB07 376 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 ACTR3BQ9P1U1 418 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 RPS6KB2Q9UBS0 482 aa8.51□□□□□ -1.05
RTN4-211ENST00000438462 M0R2N4 97 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 HMGN4O00479 90 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 CCL3L1P16619 93 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 PRPS1L1P21108 318 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 RPL3P39023 403 aaKnown RBP8.5□□□□□ -1.05
RTN4-211ENST00000438462 DYNC1I2Q13409 638 aaKnown RBP8.5□□□□□ -1.05
RTN4-211ENST00000438462 ENDOGQ14249 297 aaKnown RBP8.5□□□□□ -1.05
RTN4-211ENST00000438462 FAT1Q14517 4588 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 TMEM177Q53S58 311 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 RNF220Q5VTB9 566 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 C8orf74Q6P047 294 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 BAIAP2L2Q6UXY1 529 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 LRRC74BQ6ZQY2 392 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 CATSPERDQ86XM0 798 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 OR1N2Q8NGR9 330 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 OR2T11Q8NH01 316 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 OR52P1PQ8NH57 321 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 PYROXD1Q8WU10 500 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 DLX4Q92988 240 aaPredicted RBP8.5□□□□□ -1.05
RTN4-211ENST00000438462 ZNF503Q96F45 646 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 EPYCQ99645 322 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 MTHFD2LQ9H903 347 aaPredicted RBP8.5□□□□□ -1.05
RTN4-211ENST00000438462 SNTG1Q9NSN8 517 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 P2RX2Q9UBL9 471 aa8.5□□□□□ -1.05
RTN4-211ENST00000438462 ZNF443Q9Y2A4 671 aaPredicted RBP8.5□□□□□ -1.05
RTN4-211ENST00000438462 HTR3EA5X5Y0 456 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 M0QZK8 103 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 TRMUO75648 421 aaKnown RBP8.49□□□□□ -1.05
RTN4-211ENST00000438462 CNIH1O95406 144 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 DBHP09172 617 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 OR8U9P0C7N5 309 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 BGNP21810 368 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 CENPAP49450 140 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 LINC00205P59089 165 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 ALG10BQ5I7T1 473 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 ATPAF1Q5TC12 328 aaPredicted RBP8.49□□□□□ -1.05
RTN4-211ENST00000438462 ZNF788Q6ZQV5 615 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 ZDHHC23Q8IYP9 409 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 TCP10LQ8TDR4 215 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 MS4A14Q96JA4 679 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 MRPL57Q9BQC6 102 aaKnown RBP8.49□□□□□ -1.05
RTN4-211ENST00000438462 PAIP1Q9H074 479 aaKnown RBP8.49□□□□□ -1.05
RTN4-211ENST00000438462 PLEKHA3Q9HB20 300 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 TAS2R5Q9NYW4 299 aa8.49□□□□□ -1.05
RTN4-211ENST00000438462 A0A1B0GWA3 101 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 MCIDASD6RGH6 385 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 SGCEO43556 437 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 C1QCP02747 245 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 GMFBP60983 142 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 LYG2Q86SG7 212 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 GTSCR1Q86UQ5 136 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 NATD1Q8N6N6 113 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 RNF152Q8N8N0 203 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 NDNFQ8TB73 568 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 ASB10Q8WXI3 467 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms