RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 NDNFQ8TB73 568 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 DYNC2LI1Q8TCX1 351 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 DNAJA4Q8WW22 397 aaPredicted RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 METTL21AQ8WXB1 218 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 TMEM80Q96HE8 168 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 CXorf58Q96LI9 332 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 C17orf77Q96MU5 243 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 OPALINQ96PE5 141 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 MGLLQ99685 303 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 SF3B5Q9BWJ5 86 aaKnown RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 MND1Q9BWT6 205 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 OR2B2Q9GZK3 357 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 RACGAP1Q9H0H5 632 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 FGF20Q9NP95 211 aaPredicted RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 FANCFQ9NPI8 374 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 DDX28Q9NUL7 540 aaKnown RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 CLEC2DQ9UHP7 191 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 RARRES3Q9UL19 164 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 TRAV27A0A087WT01 109 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 A0A1W2PQD3 144 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 IRGMA1A4Y4 181 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 SNTNA6NMZ2 147 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 EFCAB9A8MZ26 197 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 HCN1O60741 890 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 ICOSLGO75144 302 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 CSO75390 466 aaKnown RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 CLN5O75503 358 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 RCBTB2O95199 551 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 SLC2A10O95528 541 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 RAB36O95755 333 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 IGF2P01344 180 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 HMGN1P05114 100 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 HBQ1P09105 142 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 ZNF883P0CG24 379 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 PAICSP22234 425 aaKnown RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 OR3A3P47888 321 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 FUT6P51993 359 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 VBP1P61758 197 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 RPS4XP62701 263 aaKnown RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 PSPHP78330 225 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 HSF2Q03933 536 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 LGALS3BPQ08380 585 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 SNTB2Q13425 540 aaKnown RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 SSX1Q16384 188 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 KLHL22Q53GT1 634 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 PXDC1Q5TGL8 231 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 NXNL2Q5VZ03 156 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 SMARCD3Q6STE5 483 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 CBLN3Q6UW01 205 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 LINC00299Q6ZSB3 139 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 ANKRD37Q7Z713 158 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 SLC34A3Q8N130 599 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 CYP4Z2PQ8N1L4 340 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 LRRC17Q8N6Y2 441 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 ZNF485Q8NCK3 441 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 APCDD1LQ8NCL9 501 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 NFAM1Q8NET5 270 aaPredicted RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 OR52L1Q8NGH7 329 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 MRPL53Q96EL3 112 aaKnown RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 GPR137Q96N19 417 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 CCNL2Q96S94 520 aaPredicted RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 SLC19A3Q9BZV2 496 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 SLC26A1Q9H2B4 701 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 MCCC2Q9HCC0 563 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 APMAPQ9HDC9 416 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 CMC2Q9NRP2 79 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 ACOXLQ9NUZ1 547 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 MRTO4Q9UKD2 239 aaKnown RBP5.45□□□□□ -1.54
SPEN-202ENST00000438066 ICAM5Q9UMF0 924 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 ERGIC3Q9Y282 383 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 ETV7Q9Y603 341 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 COX11Q9Y6N1 276 aa5.45□□□□□ -1.54
SPEN-202ENST00000438066 IGKV1D-42A0A075B6H8 117 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 LOC101059948A0A1B0GTJ6 334 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 SAGE2PA6NJ88 616 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 J3QRE1 110 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 CCRL2O00421 344 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 ZNF264O43296 627 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 AIREO43918 545 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 PRSS2P07478 247 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 LIMS3P0CW19 117 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 LIMS4P0CW20 117 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 FGF5P12034 268 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 CEACAM1P13688 526 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 IL12BP29460 328 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 HTR1FP30939 366 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 PRDX2P32119 198 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 TGFBR1P36897 503 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 ETV5P41161 510 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 ETV1P50549 477 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 DUSP3P51452 185 aaPredicted RBP5.44□□□□□ -1.54
SPEN-202ENST00000438066 LSM3P62310 102 aaKnown RBP5.44□□□□□ -1.54
SPEN-202ENST00000438066 DCDP81605 110 aaKnown RBP5.44□□□□□ -1.54
SPEN-202ENST00000438066 ZNF117Q03924 483 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 ZFP36L1Q07352 338 aaKnown RBP5.44□□□□□ -1.54
SPEN-202ENST00000438066 PLCXD2Q0VAA5 305 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 MLLT11Q13015 90 aaPredicted RBP5.44□□□□□ -1.54
SPEN-202ENST00000438066 SPHARQ15513 63 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 ZNF260Q3ZCT1 412 aa5.44□□□□□ -1.54
SPEN-202ENST00000438066 NIPAL3Q6P499 406 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms