RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NIPSNAP1Q9BPW8 284 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 EGLN1Q9GZT9 426 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 RPS23P62266 143 aaKnown RBP10.52□□□□□ -0.72
PTCH1-209ENST00000437951 SNRPNP63162 240 aaKnown RBP10.52□□□□□ -0.72
PTCH1-209ENST00000437951 ACKR1Q16570 336 aa10.52□□□□□ -0.72
PTCH1-209ENST00000437951 C12orf54Q6X4T0 127 aa10.52□□□□□ -0.72
PTCH1-209ENST00000437951 HSD17B8Q92506 261 aa10.52□□□□□ -0.72
PTCH1-209ENST00000437951 CKAP5Q14008 2032 aa10.52□□□□□ -0.72
PTCH1-209ENST00000437951 LOC102724200A0A096LPH7 203 aaPredicted RBP10.52□□□□□ -0.72
PTCH1-209ENST00000437951 DUS4LO95620 317 aaKnown RBP10.52□□□□□ -0.72
PTCH1-209ENST00000437951 F2P00734 622 aa10.52□□□□□ -0.72
PTCH1-209ENST00000437951 RPL27P61353 136 aaKnown RBP10.52□□□□□ -0.72
PTCH1-209ENST00000437951 OR2T10Q8NGZ9 312 aa10.52□□□□□ -0.72
PTCH1-209ENST00000437951 OR8B4Q96RC9 309 aa10.52□□□□□ -0.72
PTCH1-209ENST00000437951 ADAT1Q9BUB4 502 aaKnown RBP10.52□□□□□ -0.72
PTCH1-209ENST00000437951 OCEL1Q9H607 264 aa10.52□□□□□ -0.72
PTCH1-209ENST00000437951 SLC17A4Q9Y2C5 497 aa10.52□□□□□ -0.72
PTCH1-209ENST00000437951 NALCNQ8IZF0 1738 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 HPP00738 406 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 FABP2P12104 132 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 CD46P15529 392 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 HTR1DP28221 377 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 HYAL4Q2M3T9 481 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 MYPOPQ86VE0 399 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-209ENST00000437951 OR2T6Q8NHC8 308 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 TEAD3Q99594 435 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 CMC2Q9NRP2 79 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 FKBP11Q9NYL4 201 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 TAS2R4Q9NYW5 299 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 RCL1Q9Y2P8 373 aaKnown RBP10.52□□□□□ -0.73
PTCH1-209ENST00000437951 A0A1W2PNV4 684 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 MAP1LC3B2A6NCE7 125 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 LDB3O75112 727 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 GPX5O75715 221 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 KIR2DS2P43631 304 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 DSC1Q08554 894 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 SELENBP1Q13228 472 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 CHST14Q8NCH0 376 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 OR10A7Q8NGE5 316 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 MAP1LC3BQ9GZQ8 125 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 FGF20Q9NP95 211 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-209ENST00000437951 HEATR5BQ9P2D3 2071 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 ROBO1Q9Y6N7 1651 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 OR52A4PA6NMU1 304 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 PRAMEF26H0Y7S4 382 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 EIF4E2O60573 245 aaKnown RBP10.52□□□□□ -0.73
PTCH1-209ENST00000437951 TGFBR1P36897 503 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 APOBEC1P41238 236 aaKnown RBP10.52□□□□□ -0.73
PTCH1-209ENST00000437951 OR51H1Q8NH63 302 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 COMMD5Q9GZQ3 224 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 LINC00597Q9H2U6 94 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 MMACHCQ9Y4U1 282 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 FIGNL2A6NMB9 653 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 SELENOFO60613 162 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 CMTM4Q8IZR5 234 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 CARFQ8N187 725 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 POM121L2Q96KW2 1035 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 CACNG4Q9UBN1 327 aa10.52□□□□□ -0.73
PTCH1-209ENST00000437951 RRADP55042 308 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 PAFAH1B2P68402 229 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 VWA2Q5GFL6 755 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 DTD2Q96FN9 168 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 POM121Q96HA1 1249 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 TMED7-TICAM2A0A0A6YYA0 188 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 PMS2P1A4D2B8 440 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 SH2D7A6NKC9 451 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-209ENST00000437951 RHBDL1O75783 438 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 NID1P14543 1247 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 BCL3P20749 454 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 CD1CP29017 333 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 NTSR1P30989 418 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 ADRA1AP35348 466 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 C19orf57Q0VDD7 668 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 IL13RA2Q14627 380 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 MAMDC4Q6UXC1 1216 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 TMEM64Q6YI46 380 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 Q6ZPB1 254 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-209ENST00000437951 H1FNTQ75WM6 255 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-209ENST00000437951 C6orf201Q7Z4U5 140 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 NXPE3Q969Y0 559 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 TMED7Q9Y3B3 224 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 AKAP6Q13023 2319 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 NUP188Q5SRE5 1749 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 TCF21O43680 179 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 ACAA1P09110 424 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-209ENST00000437951 ANKRD34CP0C6C1 535 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 B2MP61769 119 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 EXOSC7Q15024 291 aaKnown RBP10.51□□□□□ -0.73
PTCH1-209ENST00000437951 IGFBP7Q16270 282 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 KHDC1LQ5JSQ8 128 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 MFSD12Q6NUT3 480 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 FAHD2BQ6P2I3 314 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-209ENST00000437951 OR52L2PQ8NGH6 319 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 TSACCQ96A04 125 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-209ENST00000437951 FAHD2AQ96GK7 314 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 SLC6A1P30531 599 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 EVX2Q03828 476 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 SMAGPQ0VAQ4 97 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 ZNF383Q8NA42 475 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms