RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 XKRXQ6PP77 449 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 PAMR1Q6UXH9 720 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 CDH20Q9HBT6 801 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 LOC107986453A0A1B0GWG9 222 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 SLC22A1O15245 554 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 IGLV3-1P01715 115 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 OCM2P0CE71 109 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 VBP1P61758 197 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 NCS1P62166 190 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 CDSNQ15517 529 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 C22orf42Q6IC83 251 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 UNQ9370/PRO34162Q6UXP9 181 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 CEACAM19Q7Z692 300 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 OR10AC1Q8NH08 325 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 OR51E1Q8TCB6 317 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 THRSPQ92748 146 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 APOBEC3DQ96AK3 386 aaPredicted RBP19.93■□□□□ 0.78
CPSF4-204ENST00000436336 OR14A2Q96R54 314 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 PRR14LQ5THK1 2151 aa19.93■□□□□ 0.78
CPSF4-204ENST00000436336 HEATR1Q9H583 2144 aaKnown RBP19.93■□□□□ 0.78
CPSF4-204ENST00000436336 IGHV1-18A0A0C4DH31 117 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 A0A1B0GVI7 797 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 C5orf63A6NC05 138 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 ZNF879B4DU55 563 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 ICMTO60725 284 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 CECR9P0C854 216 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 ZMAT1Q5H9K5 638 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 PAQR4Q8N4S7 273 aaPredicted RBP19.92■□□□□ 0.78
CPSF4-204ENST00000436336 OR51A4Q8NGJ6 313 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 TSEN15Q8WW01 171 aaKnown RBP19.92■□□□□ 0.78
CPSF4-204ENST00000436336 PHYHIPQ92561 330 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 GPR84Q9NQS5 396 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 ZNF391Q9UJN7 358 aa19.92■□□□□ 0.78
CPSF4-204ENST00000436336 A0A1B0GTI1 187 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 J3QW42 95 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 SYT7O43581 403 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 ZG16O60844 167 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 CCL1P22362 96 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 MAPK3P27361 379 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-204ENST00000436336 C22orf34Q6ZV56 151 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 ZNF808Q8N4W9 903 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-204ENST00000436336 ITLN2Q8WWU7 325 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-204ENST00000436336 SGK3Q96BR1 496 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 KCNS3Q9BQ31 491 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 RGCCQ9H4X1 137 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 RNF167Q9H6Y7 350 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 TBCCD1Q9NVR7 557 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 NPAP1Q9NZP6 1156 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 DHDHQ9UQ10 334 aa19.91■□□□□ 0.78
CPSF4-204ENST00000436336 H3BSH0 61 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 XRCC2O43543 280 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 CLDN14O95500 239 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 WNT5AP41221 380 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 ZNF83P51522 516 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 SORDQ00796 357 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 GFOD2Q3B7J2 385 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 SEZ6L2Q6UXD5 910 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 DOK3Q7L591 496 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 COMMD2Q86X83 199 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 KCTD7Q96MP8 289 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 EIF3KQ9UBQ5 218 aaKnown RBP19.9■□□□□ 0.78
CPSF4-204ENST00000436336 ZNF35P13682 527 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 ZNF12P17014 697 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 TGFBR1P36897 503 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 GLYATL3Q5SZD4 288 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 PLPP7Q8NBV4 271 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 CCDC54Q8NEL0 328 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 LYZL4Q96KX0 146 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 DERL3Q96Q80 235 aa19.9■□□□□ 0.78
CPSF4-204ENST00000436336 RELNP78509 3460 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 TRIM64BA6NI03 449 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 M0R1B8 84 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 ARL6IP5O75915 188 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 ATE1O95260 518 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 UCHL1P09936 223 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 MAGEB1P43366 347 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 SOX2P48431 317 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 ALKBH2Q6NS38 261 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 ZNF101Q8IZC7 436 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 OR13C3Q8NGS6 347 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 TMEM106AQ96A25 262 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 REEP6Q96HR9 211 aa19.89■□□□□ 0.77
CPSF4-204ENST00000436336 NGFP01138 241 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 RAF1P04049 648 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 CD2P06729 351 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 THBDP07204 575 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 PCSK6P29122 969 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 TFF3Q07654 80 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 MALLQ13021 153 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 SPCS2Q15005 226 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 Q6ZSR3 168 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 USP43Q70EL4 1123 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 KBTBD8Q8NFY9 601 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 OR5L1Q8NGL2 311 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 OR2AE1Q8NHA4 323 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 AKAP1Q92667 903 aaKnown RBP eCLIP19.88■□□□□ 0.77
CPSF4-204ENST00000436336 SPSB4Q96A44 273 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 FAM71F1Q96KD3 344 aaPredicted RBP19.88■□□□□ 0.77
CPSF4-204ENST00000436336 WFIKKN1Q96NZ8 548 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 MED18Q9BUE0 208 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms