RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 OR10H3O60404 316 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 FAM20BO75063 409 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 PTP4A3O75365 173 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 DIRAS1O95057 198 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 GADD45GO95257 159 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 FSTL3O95633 263 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 TXNDC12O95881 172 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 HLA-DPB1P04440 258 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 H2AFXP16104 143 aaPredicted RBP6.48□□□□□ -1.37
VPS50-203ENST00000436177 FUT4P22083 530 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 RBMXP38159 391 aaKnown RBP6.48□□□□□ -1.37
VPS50-203ENST00000436177 MDH1P40925 334 aaKnown RBP6.48□□□□□ -1.37
VPS50-203ENST00000436177 CDKN2AP42771 156 aaKnown RBP6.48□□□□□ -1.37
VPS50-203ENST00000436177 OMPP47874 163 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 NPY4RP50391 375 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 BPIFB3P59826 476 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 PSME3P61289 254 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 GK2Q14410 553 aaPredicted RBP6.48□□□□□ -1.37
VPS50-203ENST00000436177 TAF13Q15543 124 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 FAM201AQ5SY85 155 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 ZNF362Q5T0B9 420 aaPredicted RBP6.48□□□□□ -1.37
VPS50-203ENST00000436177 METTL11BQ5VVY1 283 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 WDR25Q64LD2 544 aaPredicted RBP6.48□□□□□ -1.37
VPS50-203ENST00000436177 CGB2Q6NT52 195 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 C16orf87Q6PH81 154 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 BRD3OSQ6XYD6 125 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 CFAP77Q6ZQR2 320 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 PTCHD4Q6ZW05 846 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 OR10S1Q8NGN2 331 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 OR4K13Q8NH42 304 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 SLCO4A1Q96BD0 722 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 TMIGD2Q96BF3 282 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 ZNF799Q96GE5 643 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 ZNF48Q96MX3 618 aaPredicted RBP6.48□□□□□ -1.37
VPS50-203ENST00000436177 NMNAT3Q96T66 252 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 COPS4Q9BT78 406 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 OR52D1Q9H346 318 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 BEX1Q9HBH7 125 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 NOX4Q9NPH5 578 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 ERVK-18Q9QC07 812 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 RNF7Q9UBF6 113 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 MAGEL2Q9UJ55 1249 aa6.48□□□□□ -1.37
VPS50-203ENST00000436177 TRAV38-1A0A0B4J264 116 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 BTBD17A6NE02 478 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 CD300LBA8K4G0 201 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 LGALS8O00214 317 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 ARPC3O15145 178 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 MLNRO43193 412 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 ADAM20O43506 726 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 NDUFA2O43678 99 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 IDH3BO43837 385 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 SASH3O75995 380 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 PLATP00750 562 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 LIPFP07098 398 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 ACSM4P0C7M7 580 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 HIST1H1CP16403 213 aaKnown RBP6.47□□□□□ -1.37
VPS50-203ENST00000436177 MDKP21741 143 aaPredicted RBP6.47□□□□□ -1.37
VPS50-203ENST00000436177 CA6P23280 308 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 OMGP23515 440 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 RAG2P55895 527 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 HIST1H3AP68431 136 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 PDCD1Q15116 288 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 SEC23BQ15437 767 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 DEFB112Q30KQ8 113 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 RFX4Q33E94 735 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 MIDNQ504T8 468 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 HIST2H3PS2Q5TEC6 136 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 PRAMEF6Q5VXH4 476 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 GLYATQ6IB77 296 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 SLC18B1Q6NT16 456 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 RPL13AP3Q6NVV1 102 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 HIST2H3AQ71DI3 136 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 OR6V1Q8N148 313 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 LNX2Q8N448 690 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 PNLDC1Q8NA58 520 aaKnown RBP6.47□□□□□ -1.37
VPS50-203ENST00000436177 SPERTQ8NA61 448 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 SCCPDHQ8NBX0 429 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 SDR9C7Q8NEX9 313 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 OR2T4Q8NH00 348 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 OR8S1Q8NH09 359 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 Q8TCH9 128 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 SSMEM1Q8WWF3 244 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 GATAD2BQ8WXI9 593 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 UBE2FQ969M7 185 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 C1orf147Q96MC9 270 aaPredicted RBP6.47□□□□□ -1.37
VPS50-203ENST00000436177 CCT8L2Q96SF2 557 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 TRIM15Q9C019 465 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 SLITRK2Q9H156 845 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 OPA3Q9H6K4 179 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 MARCH7Q9H992 704 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 DCAF13Q9NV06 445 aaKnown RBP6.47□□□□□ -1.37
VPS50-203ENST00000436177 C14orf119Q9NWQ9 140 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 B9D1Q9UPM9 204 aa6.47□□□□□ -1.37
VPS50-203ENST00000436177 TGP01266 2768 aa6.46□□□□□ -1.37
VPS50-203ENST00000436177 MDFIC2A0A1B0GVS7 189 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 ANKRD30BLA7E2S9 258 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 SRRM5B3KS81 715 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 M0QZ24 198 aa6.46□□□□□ -1.38
VPS50-203ENST00000436177 P2RY10O00398 339 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms