RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 SPRYD4Q8WW59 207 aaPredicted RBP9.73□□□□□ -0.85
COL28A1-203ENST00000435823 TIMD4Q96H15 378 aa9.73□□□□□ -0.85
COL28A1-203ENST00000435823 TMEM100Q9NV29 134 aa9.73□□□□□ -0.85
COL28A1-203ENST00000435823 IMPAD1Q9NX62 359 aa9.73□□□□□ -0.85
COL28A1-203ENST00000435823 TMEM14AQ9Y6G1 99 aa9.73□□□□□ -0.85
COL28A1-203ENST00000435823 ZNF469Q96JG9 3925 aaPredicted RBP9.72□□□□□ -0.85
COL28A1-203ENST00000435823 GGT3PA6NGU5 568 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 CLDN25C9JDP6 229 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 TACSTD2P09758 323 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 ALOX5APP20292 161 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 EFNB1P98172 346 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 GABPB1Q06547 395 aaPredicted RBP9.72□□□□□ -0.85
COL28A1-203ENST00000435823 KRTAP1-1Q07627 177 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 ZSCAN26Q16670 478 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 TIGD6Q17RP2 521 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 ZIK1Q3SY52 487 aaPredicted RBP9.72□□□□□ -0.85
COL28A1-203ENST00000435823 GLYATL3Q5SZD4 288 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 CYB5R2Q6BCY4 276 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 Q6ZR03 302 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 ZBTB49Q6ZSB9 765 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 BCDIN3DQ7Z5W3 292 aaKnown RBP9.72□□□□□ -0.85
COL28A1-203ENST00000435823 BHLHE23Q8NDY6 225 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 OR52H1Q8NGJ2 320 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 FAM81AQ8TBF8 368 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 CCL17Q92583 94 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 HPS1Q92902 700 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 EME1Q96AY2 570 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 PGAM5Q96HS1 289 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 AMELYQ99218 206 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 MNTQ99583 582 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 SLC30A2Q9BRI3 323 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 REPIN1Q9BWE0 567 aaKnown RBP9.72□□□□□ -0.85
COL28A1-203ENST00000435823 OR10A2Q9H208 303 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 NIPAL2Q9H841 368 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 YAE1D1Q9NRH1 226 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 DNAJC27Q9NZQ0 273 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 WARS2Q9UGM6 360 aaKnown RBP9.72□□□□□ -0.85
COL28A1-203ENST00000435823 IL19Q9UHD0 177 aa9.72□□□□□ -0.85
COL28A1-203ENST00000435823 NOP16Q9Y3C1 178 aaKnown RBP9.72□□□□□ -0.85
COL28A1-203ENST00000435823 ZANQ9Y493 2812 aa9.71□□□□□ -0.85
COL28A1-203ENST00000435823 LRP5LA4QPB2 252 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 CD300LBA8K4G0 201 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF670-ZNF695F2Z2N8 137 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 PHYHO14832 338 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 LILRA1O75019 489 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 IGHV4-31P0DP07 118 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 CFL1P23528 166 aaKnown RBP9.71□□□□□ -0.86
COL28A1-203ENST00000435823 SRP9P49458 86 aaKnown RBP9.71□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF121P58317 390 aaPredicted RBP9.71□□□□□ -0.86
COL28A1-203ENST00000435823 PRR20EP86478 221 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 PRR20CP86479 221 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 PRR20DP86480 221 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 PRR20BP86481 221 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 PRR20AP86496 221 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF92Q03936 586 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 POU4F2Q12837 409 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 TRIP10Q15642 601 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 DEGS2Q6QHC5 323 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 LRRN1Q6UXK5 716 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 FAM57BQ71RH2 274 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 PEG10Q86TG7 708 aaKnown RBP9.71□□□□□ -0.86
COL28A1-203ENST00000435823 SLC35F2Q8IXU6 374 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 OR10AD1Q8NGE0 317 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 OR2AE1Q8NHA4 323 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 TRUB1Q8WWH5 349 aaKnown RBP9.71□□□□□ -0.86
COL28A1-203ENST00000435823 ASB17Q8WXJ9 295 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 RAB1CQ92928 201 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 RFKQ969G6 155 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 HRASLS5Q96KN8 279 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 OR2V2Q96R30 315 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 MROQ9BYG7 248 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 SLC22A4Q9H015 551 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 BRD7Q9NPI1 651 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 HAO2Q9NYQ3 351 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 KLHDC2Q9Y2U9 406 aa9.71□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF254O75437 659 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF16P17020 682 aaPredicted RBP9.7□□□□□ -0.86
COL28A1-203ENST00000435823 HTR1FP30939 366 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 ATP6V1E1P36543 226 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 DDOSTP39656 456 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 HCCSP53701 268 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 PRSS12P56730 875 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 PSMA6P60900 246 aaKnown RBP9.7□□□□□ -0.86
COL28A1-203ENST00000435823 MVKQ03426 396 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 TMED1Q13445 227 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 GFOD2Q3B7J2 385 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 ITLN1Q8WWA0 313 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 SPSB4Q96A44 273 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 REEP6Q96HR9 211 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 MEGF10Q96KG7 1140 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 OR8B4Q96RC9 309 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 RGCCQ9H4X1 137 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 NARFLQ9H6Q4 476 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 ADGRL4Q9HBW9 690 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 CLN6Q9NWW5 311 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 TREM2Q9NZC2 230 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 MRPL15Q9P015 296 aaKnown RBP9.7□□□□□ -0.86
COL28A1-203ENST00000435823 IKZF2Q9UKS7 526 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 PPP1R3CQ9UQK1 317 aa9.7□□□□□ -0.86
COL28A1-203ENST00000435823 LRP12Q9Y561 859 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms