RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CMBLQ96DG6 245 aa16.45■□□□□ 0.22
CLK1-205ENST00000434813 PRRT1Q99946 306 aa16.45■□□□□ 0.22
CLK1-205ENST00000434813 FXYD6-FXYD2A0A087WZ82 144 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 OR14I1A6ND48 311 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 ZNF726A6NNF4 738 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 SHOXO15266 292 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 GDF9O60383 454 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 UMODP07911 640 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 NR2C1P13056 603 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 KLK2P20151 261 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 HLXQ14774 488 aaPredicted RBP16.44■□□□□ 0.22
CLK1-205ENST00000434813 SCGB2B2Q4G0G5 96 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 RNASE10Q5GAN6 216 aaKnown RBP16.44■□□□□ 0.22
CLK1-205ENST00000434813 B3GNTL1Q67FW5 361 aaPredicted RBP16.44■□□□□ 0.22
CLK1-205ENST00000434813 OPN5Q6U736 354 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 TMPPEQ6ZT21 453 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 ABHD12BQ7Z5M8 362 aaPredicted RBP16.44■□□□□ 0.22
CLK1-205ENST00000434813 OR4S1Q8NGB4 309 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 IMMP1LQ96LU5 166 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 ZNF700Q9H0M5 742 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 FXYD6Q9H0Q3 95 aa16.44■□□□□ 0.22
CLK1-205ENST00000434813 FARSAQ9Y285 508 aaKnown RBP16.44■□□□□ 0.22
CLK1-205ENST00000434813 RER1O15258 196 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 RP2O75695 350 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 CELA2AP08217 269 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 COX6A1P12074 109 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 MPLP40238 635 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 PRKXP51817 358 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 GMFBP60983 142 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 EXT1Q16394 746 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 CDNFQ49AH0 187 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 LY6G6FQ5SQ64 297 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 TMUB2Q71RG4 321 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 PGAP1Q75T13 922 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 OR2W3Q7Z3T1 314 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 OR5AS1Q8N127 324 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 PCNPQ8WW12 178 aaKnown RBP16.43■□□□□ 0.22
CLK1-205ENST00000434813 SMOC1Q9H4F8 434 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 KCNN3Q9UGI6 736 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 WDR87Q6ZQQ6 2873 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 PRR33A8MZF0 331 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 TLX3O43711 291 aaPredicted RBP16.43■□□□□ 0.22
CLK1-205ENST00000434813 B3GALNT1O75752 331 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 CRYZL1O95825 349 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 PDGFAP04085 211 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 PPP3CBP16298 524 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 CX3CR1P49238 355 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 GRB2P62993 217 aaKnown RBP16.43■□□□□ 0.22
CLK1-205ENST00000434813 DHRS2Q13268 280 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 CLVS2Q5SYC1 327 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 COMMD2Q86X83 199 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 ANGPTL5Q86XS5 388 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 CHST4Q8NCG5 386 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 GPR84Q9NQS5 396 aa16.43■□□□□ 0.22
CLK1-205ENST00000434813 DLL1O00548 723 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 KLK3P07288 261 aaPredicted RBP16.42■□□□□ 0.22
CLK1-205ENST00000434813 SLC2A1P11166 492 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 RPA2P15927 270 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 ABOP16442 354 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 H3F3AP84243 136 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 TRA2AQ13595 282 aaKnown RBP eCLIP16.42■□□□□ 0.222e-9■■■■□ 22.8
CLK1-205ENST00000434813 NAXDQ8IW45 347 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 OR10R2Q8NGX6 335 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 NUDCD2Q8WVJ2 157 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 ANGPTL4Q9BY76 406 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 ARRDC1-AS1Q9H2J1 176 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 ZNF319Q9P2F9 582 aa16.42■□□□□ 0.22
CLK1-205ENST00000434813 RFPL4AA6NLU0 287 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 RFPL4AL1F8VTS6 287 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 AVPR2P30518 371 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 CLDN17P56750 224 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 AANATQ16613 207 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 NKPD1Q17RQ9 610 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 LPCAT3Q6P1A2 487 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 DOK3Q7L591 496 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 ZDHHC22Q8N966 263 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 AGBL5Q8NDL9 886 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 STEAP2Q8NFT2 490 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 OR5M8Q8NGP6 311 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 MR1Q95460 341 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 NTNG2Q96CW9 530 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 ARL6Q9H0F7 186 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 VSIG4Q9Y279 399 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 PTRH2Q9Y3E5 179 aaKnown RBP16.41■□□□□ 0.22
CLK1-205ENST00000434813 I3L521 148 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 NTN3O00634 580 aaPredicted RBP16.41■□□□□ 0.22
CLK1-205ENST00000434813 KLF7O75840 302 aaPredicted RBP16.41■□□□□ 0.22
CLK1-205ENST00000434813 ZNF17P17021 662 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 TBPP20226 339 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 ANOS1P23352 680 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 LSM6P62312 80 aaKnown RBP16.41■□□□□ 0.22
CLK1-205ENST00000434813 SORDQ00796 357 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 SRSF4Q08170 494 aaKnown RBP16.41■□□□□ 0.22
CLK1-205ENST00000434813 GVQW1Q8N7I0 195 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 M1APQ8TC57 530 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 C1orf147Q96MC9 270 aaPredicted RBP16.41■□□□□ 0.22
CLK1-205ENST00000434813 SOX7Q9BT81 388 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 LPAR5Q9H1C0 372 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 IFT46Q9NQC8 304 aa16.41■□□□□ 0.22
CLK1-205ENST00000434813 PLEKHA6Q9Y2H5 1048 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms