RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 SLC7A2P52569 658 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 TPTEP56180 551 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 PRSS12P56730 875 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 MPPED2Q15777 294 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 C11orf91Q3C1V1 193 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 CFAP77Q6ZQR2 320 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 RHOUQ7L0Q8 258 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 MRPL21Q7Z2W9 205 aaKnown RBP12.34□□□□□ -0.43
PRKDC-203ENST00000432581 LINC00346Q8IVM7 164 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 OR6V1Q8N148 313 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 UBE2FQ969M7 185 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 SRA1Q9HD15 236 aaKnown RBP12.34□□□□□ -0.43
PRKDC-203ENST00000432581 NDUFAF4Q9P032 175 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 CTSZQ9UBR2 303 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 CYB5R1Q9UHQ9 305 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 RNF114Q9Y508 228 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 CMYA5Q8N3K9 4069 aa12.34□□□□□ -0.43
PRKDC-203ENST00000432581 IGHV1-69DA0A0B4J2H0 117 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 TRBV4-1A0A0J9YWV2 114 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 CD300LBA8K4G0 201 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 NME4O00746 187 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 ARPC3O15145 178 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 ADAM20O43506 726 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 IGHV1-69P01742 117 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 CA6P23280 308 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 SLC6A6P31641 620 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 GSK3BP49841 420 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 SF3A3Q12874 501 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRKDC-203ENST00000432581 OR8B8Q15620 311 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 SFRP4Q6FHJ7 346 aaPredicted RBP12.33□□□□□ -0.44
PRKDC-203ENST00000432581 SPERTQ8NA61 448 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 FANK1Q8TC84 345 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 SPTSSAQ969W0 71 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 DHRS1Q96LJ7 313 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 NMNAT3Q96T66 252 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 RBM4BQ9BQ04 359 aaKnown RBP12.33□□□□□ -0.44
PRKDC-203ENST00000432581 ADAT1Q9BUB4 502 aaKnown RBP12.33□□□□□ -0.44
PRKDC-203ENST00000432581 PNRC2Q9NPJ4 139 aaKnown RBP12.33□□□□□ -0.44
PRKDC-203ENST00000432581 ARMCX1Q9P291 453 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 KCNG2Q9UJ96 466 aa12.33□□□□□ -0.44
PRKDC-203ENST00000432581 PRKDCP78527 4128 aaKnown RBP12.32□□□□□ -0.44
PRKDC-203ENST00000432581 OOEPA6NGQ2 149 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 M0R135 149 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 GPR137BO60478 399 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 CLPXO76031 633 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 ECDO95905 644 aaPredicted RBP12.32□□□□□ -0.44
PRKDC-203ENST00000432581 HLA-DQA2P01906 255 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 HIST1H1CP16403 213 aaKnown RBP12.32□□□□□ -0.44
PRKDC-203ENST00000432581 GGT2P36268 569 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 MZT1Q08AG7 82 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 KRT72Q14CN4 511 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 SEC23BQ15437 767 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 TAF9Q16594 264 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 RFX4Q33E94 735 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 ASPHD2Q6ICH7 369 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 CGB2Q6NT52 195 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 NAA40Q86UY6 237 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 ZBTB46Q86UZ6 589 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 LDLRAD3Q86YD5 345 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 BOLLQ8N9W6 283 aaKnown RBP12.32□□□□□ -0.44
PRKDC-203ENST00000432581 OR4K13Q8NH42 304 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 LINC01006Q8NI28 216 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 LHX4Q969G2 390 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 ZNF799Q96GE5 643 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 KCTD14Q9BQ13 255 aaPredicted RBP12.32□□□□□ -0.44
PRKDC-203ENST00000432581 SIRPDQ9H106 197 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 RPRD1BQ9NQG5 326 aaKnown RBP12.32□□□□□ -0.44
PRKDC-203ENST00000432581 MRPL15Q9P015 296 aaKnown RBP12.32□□□□□ -0.44
PRKDC-203ENST00000432581 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
PRKDC-203ENST00000432581 GGT3PA6NGU5 568 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 IDH3BO43837 385 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 COX4I1P13073 169 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 NCK1P16333 377 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 NOS3P29474 1203 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 SMIM11AP58511 58 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 KRTAP10-3P60369 221 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 HOXA4Q00056 320 aaPredicted RBP12.31□□□□□ -0.44
PRKDC-203ENST00000432581 C8orf82Q6P1X6 216 aaPredicted RBP12.31□□□□□ -0.44
PRKDC-203ENST00000432581 HACD2Q6Y1H2 254 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 GDPGP1Q6ZNW5 385 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 SCCPDHQ8NBX0 429 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 OR52J3Q8NH60 311 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 LRTOMTQ8WZ04 291 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 C7orf34Q96L11 122 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 PKP2Q99959 881 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 FUZQ9BT04 418 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 IFT27Q9BW83 186 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 OR52D1Q9H346 318 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 DPAGT1Q9H3H5 408 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 EFCAB1Q9HAE3 211 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 SMURF1Q9HCE7 757 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 C1orf123Q9NWV4 160 aa12.31□□□□□ -0.44
PRKDC-203ENST00000432581 SAMD4AQ9UPU9 718 aaKnown RBP12.31□□□□□ -0.44
PRKDC-203ENST00000432581 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.3□□□□□ -0.44
PRKDC-203ENST00000432581 SLC22A31A6NKX4 558 aa12.3□□□□□ -0.44
PRKDC-203ENST00000432581 IGHV4-59P01825 116 aa12.3□□□□□ -0.44
PRKDC-203ENST00000432581 GYPAP02724 150 aa12.3□□□□□ -0.44
PRKDC-203ENST00000432581 IER3P46695 156 aa12.3□□□□□ -0.44
PRKDC-203ENST00000432581 PROK1P58294 105 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms