RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 COPS3Q9UNS2 423 aa14.42□□□□□ -0.1
UBE3D-204ENST00000430071 CACNG2Q9Y698 323 aa14.42□□□□□ -0.1
UBE3D-204ENST00000430071 C17orf100A8MU93 164 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 RP2O75695 350 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 ALOX5APP20292 161 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 VHLP40337 213 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 RAD52P43351 418 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 CHN2P52757 468 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 ZNF91Q05481 1191 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 TMED1Q13445 227 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 IL18R1Q13478 541 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 SMN1Q16637 294 aaKnown RBP14.41□□□□□ -0.1
UBE3D-204ENST00000430071 RFLNBQ8N5W9 214 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 ZNF454Q8N9F8 522 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 CLDND2Q8NHS1 167 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 CNIH3Q8TBE1 160 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 THEM6Q8WUY1 208 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 RNF133Q8WVZ7 376 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 IPCEF1Q8WWN9 437 aaPredicted RBP14.41□□□□□ -0.1
UBE3D-204ENST00000430071 RDH5Q92781 318 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 MARS2Q96GW9 593 aaKnown RBP14.41□□□□□ -0.1
UBE3D-204ENST00000430071 ATF6BQ99941 703 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 BCL2L14Q9BZR8 327 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 OR2J1Q9GZK6 312 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 SHARPINQ9H0F6 387 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 CENPMQ9NSP4 180 aa14.41□□□□□ -0.1
UBE3D-204ENST00000430071 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.41□□□□□ -0.1
UBE3D-204ENST00000430071 PRR32B1ATL7 298 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 FAM157AC9JC47 383 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 LYNP07948 512 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 MTNR1AP48039 350 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 ECH1Q13011 328 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 TSTQ16762 297 aaKnown RBP14.4□□□□□ -0.1
UBE3D-204ENST00000430071 CR1LQ2VPA4 569 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 SLC35F2Q8IXU6 374 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 C8orf59Q8N0T1 100 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-204ENST00000430071 SETD9Q8NE22 299 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 RNFT2Q96EX2 444 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 Q96MT0 163 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 AMBNQ9NP70 447 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 LAMP5Q9UJQ1 280 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 GRIP1Q9Y3R0 1128 aa14.4□□□□□ -0.1
UBE3D-204ENST00000430071 ZNF878C9JN71 531 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 ICMTO60725 284 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 IGHV3-13P01766 116 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 ACSM4P0C7M7 580 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 DBTP11182 482 aaKnown RBP14.39□□□□□ -0.11
UBE3D-204ENST00000430071 ACHEP22303 614 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 OTX1P32242 354 aaPredicted RBP14.39□□□□□ -0.11
UBE3D-204ENST00000430071 OPRL1P41146 370 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 GPR6P46095 362 aaPredicted RBP14.39□□□□□ -0.11
UBE3D-204ENST00000430071 CDH15P55291 814 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 POU4F2Q12837 409 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 LAIR2Q6ISS4 152 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 PHC2Q8IXK0 858 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 ABHD4Q8TB40 342 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 C4orf45Q96LM5 186 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 COPS4Q9BT78 406 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 TTTY10Q9BZA0 68 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 TREM2Q9NZC2 230 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 HSPE1-MOB4S4R3N1 261 aa14.39□□□□□ -0.11
UBE3D-204ENST00000430071 ZSCAN5BA6NJL1 495 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 F5H5K5 113 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 J3QRE1 110 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 PPIHO43447 177 aaKnown RBP14.38□□□□□ -0.11
UBE3D-204ENST00000430071 ABHD16AO95870 558 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 ANOS1P23352 680 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 MMP15P51511 669 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 PPP1CBP62140 327 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 CDK5R2Q13319 367 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 AVPI1Q5T686 147 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 SSX6Q7RTT6 188 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 NAA40Q86UY6 237 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 KLF14Q8TD94 323 aaPredicted RBP14.38□□□□□ -0.11
UBE3D-204ENST00000430071 FBLIM1Q8WUP2 373 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 LGALS12Q96DT0 336 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 C1orf159Q96HA4 380 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 DCLRE1CQ96SD1 692 aaKnown RBP14.38□□□□□ -0.11
UBE3D-204ENST00000430071 TBX5Q99593 518 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 SLCO1C1Q9NYB5 712 aa14.38□□□□□ -0.11
UBE3D-204ENST00000430071 EIF3KQ9UBQ5 218 aaKnown RBP14.38□□□□□ -0.11
UBE3D-204ENST00000430071 SNTNA6NMZ2 147 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 RNF212BA8MTL3 300 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 M0R135 149 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 PSMD9O00233 223 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 PHF1O43189 567 aaPredicted RBP14.37□□□□□ -0.11
UBE3D-204ENST00000430071 SPRY3O43610 288 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 IGHV1-46P01743 117 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 ATP6V1E1P36543 226 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 PRKXP51817 358 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 SELENOVP59797 346 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 CXCR4P61073 352 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 LMO4P61968 165 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 TAF13Q15543 124 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF718Q3SXZ3 478 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 LRRN1Q6UXK5 716 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 COLCA1Q6ZS62 124 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 RHOUQ7L0Q8 258 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 THAP5Q7Z6K1 395 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 LINC01356Q8N9X3 169 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms