RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 TMEM217Q8N7C4 229 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 SUMF2Q8NBJ7 301 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 MOB1AQ9H8S9 216 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 TRBV5-3A0A0A0MS03 114 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 HS3ST1O14792 307 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 WDR1O75083 606 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 SNAPC5O75971 98 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 CD1EP15812 388 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 GPR176Q14439 515 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 DOK3Q7L591 496 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 LSMEM1Q8N8F7 131 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 CMSS1Q9BQ75 279 aaKnown RBP11.54□□□□□ -0.56
PTCH1-207ENST00000429896 ACOD1A6NK06 481 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 PMP2P02689 132 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 AKR1C1Q04828 323 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 RGS7BPQ6MZT1 257 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-207ENST00000429896 WDR88Q6ZMY6 472 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 TMEM179BQ7Z7N9 219 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 FBXL14Q8N1E6 418 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 FAM26EQ8N5C1 309 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 WDSUB1Q8N9V3 476 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 MBOAT4Q96T53 435 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 HES7Q9BYE0 225 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 ZMAT3Q9HA38 289 aaKnown RBP11.54□□□□□ -0.56
PTCH1-207ENST00000429896 TAS2R16Q9NYV7 291 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 TCF20Q9UGU0 1960 aaKnown RBP11.54□□□□□ -0.56
PTCH1-207ENST00000429896 XRCC2O43543 280 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 SBK2P0C263 348 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 ZNF83P51522 516 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 AQP6Q13520 282 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 ZNF718Q3SXZ3 478 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 OR13C9Q8NGT0 318 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 GMPPAQ96IJ6 420 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-207ENST00000429896 FAM87AP0C7U9 286 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 RAB1AP62820 205 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 APOOLQ6UXV4 268 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 NCCRP1Q6ZVX7 275 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-207ENST00000429896 TMEM59Q9BXS4 323 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 SIGLEC7Q9Y286 467 aa11.54□□□□□ -0.56
PTCH1-207ENST00000429896 KITLGP21583 273 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 UNQ6494/PRO21346Q6UXR6 183 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 DVL3Q92997 716 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-207ENST00000429896 ABHD17AQ96GS6 310 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 IGKV3D-11A0A0A0MRZ8 115 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 A0A0B4J2A0 478 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 LYZL6O75951 148 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 UMODP07911 640 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 PLPPR5Q32ZL2 321 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 SEC22AQ96IW7 307 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 OR2B2Q9GZK3 357 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 GNG12Q9UBI6 72 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 SHPKQ9UHJ6 478 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 GDF2Q9UK05 429 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-207ENST00000429896 AMDHD2Q9Y303 409 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 NEUROG3Q9Y4Z2 214 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 ZNF816-ZNF321PA0A0X1KG74 233 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 TOR1AO14656 332 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 MED6O75586 246 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 PMPCAQ10713 525 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 Q499Y3 187 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 FHL5Q5TD97 284 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 MRI1Q9BV20 369 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 GSTP1P09211 210 aaKnown RBP11.53□□□□□ -0.56
PTCH1-207ENST00000429896 PIGTQ969N2 578 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 RAB39BQ96DA2 213 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 TSPAN32Q96QS1 320 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 PTTG3PQ9NZH4 202 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 COPS3Q9UNS2 423 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 AQP7P3A6NL99 342 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 TXNL1O43396 289 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 V9GY05 133 aa11.53□□□□□ -0.56
PTCH1-207ENST00000429896 FADS1O60427 444 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 HLA-AP01891 365 aaKnown RBP11.52□□□□□ -0.56
PTCH1-207ENST00000429896 EIF4EP06730 217 aaKnown RBP11.52□□□□□ -0.56
PTCH1-207ENST00000429896 IL34Q6ZMJ4 242 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 OR52N1Q8NH53 320 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 NMNAT2Q9BZQ4 307 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 SELENOIQ9C0D9 397 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 IGLV3-12A0A075B6K2 115 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 A0A1W2PR80 420 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 SMLR1H3BR10 107 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 ZFP36L2P47974 494 aaKnown RBP11.52□□□□□ -0.56
PTCH1-207ENST00000429896 GNB2P62879 340 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 SORDQ00796 357 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 USP51Q70EK9 711 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 CTHRC1Q96CG8 243 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 DCLRE1CQ96SD1 692 aaKnown RBP11.52□□□□□ -0.56
PTCH1-207ENST00000429896 NICN1Q9BSH3 213 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 TAS2R8Q9NYW2 309 aa11.52□□□□□ -0.56
PTCH1-207ENST00000429896 DNPH1O43598 174 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 PCSK6P29122 969 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 CEBPEQ15744 281 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 OTPQ5XKR4 325 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 TMEM108Q6UXF1 575 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 MRPL41Q8IXM3 137 aaKnown RBP11.52□□□□□ -0.57
PTCH1-207ENST00000429896 AKR7LQ8NHP1 331 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 SGK3Q96BR1 496 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 NOX3Q9HBY0 568 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 C19orf12Q9NSK7 152 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms