RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 RNF222A6NCQ9 220 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 OR2F2O95006 317 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 SCGB1D2O95969 90 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 NPBWR1P48145 328 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 SLC25A1P53007 311 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 EMP2P54851 167 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 OR2F1Q13607 317 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 NKAIN1Q4KMZ8 207 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 ARL11Q969Q4 196 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 ST6GALNAC5Q9BVH7 336 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 PCED1AQ9H1Q7 454 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 PURGQ9UJV8 347 aaKnown RBP13.34□□□□□ -0.27
CACTIN-203ENST00000429344 ACTL6AO96019 429 aa13.33□□□□□ -0.27
CACTIN-203ENST00000429344 RPS4XP62701 263 aaKnown RBP13.33□□□□□ -0.27
CACTIN-203ENST00000429344 FUT7Q11130 342 aa13.33□□□□□ -0.27
CACTIN-203ENST00000429344 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.27
CACTIN-203ENST00000429344 TOMM20Q15388 145 aa13.33□□□□□ -0.27
CACTIN-203ENST00000429344 SDK2Q58EX2 2172 aa13.33□□□□□ -0.27
CACTIN-203ENST00000429344 STOML3Q8TAV4 291 aa13.33□□□□□ -0.27
CACTIN-203ENST00000429344 PTGES2Q9H7Z7 377 aa13.33□□□□□ -0.27
CACTIN-203ENST00000429344 MED9Q9NWA0 146 aa13.33□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF117Q03924 483 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 HLA-BQ31612 363 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 CARD17Q5XLA6 110 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 MAMDC2Q7Z304 686 aaPredicted RBP13.33□□□□□ -0.28
CACTIN-203ENST00000429344 BHLHE23Q8NDY6 225 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 OR10H5Q8NGA6 315 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 MAFAQ8NHW3 353 aaPredicted RBP13.33□□□□□ -0.28
CACTIN-203ENST00000429344 MCHR2Q969V1 340 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 C20orf24Q9BUV8 137 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 SRPK3Q9UPE1 567 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 PRSS37A4D1T9 235 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 OR2T1O43869 369 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 GLI4P10075 376 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 PGCP20142 388 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 ITGA3P26006 1051 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 SLC37A1P57057 533 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 EGR3Q06889 387 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 LYG2Q86SG7 212 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 PMM1Q92871 262 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 PRRT1Q99946 306 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 DUSP23Q9BVJ7 150 aa13.33□□□□□ -0.28
CACTIN-203ENST00000429344 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
CACTIN-203ENST00000429344 C9orf170A2RU37 121 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 PATE3B3GLJ2 98 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 SPP1P10451 314 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 IL11P20809 199 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 CCL7P80098 99 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 MPPED2Q15777 294 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 SHEQ5VZ18 495 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 RAB11FIP2Q7L804 512 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 TMEM229BQ8NBD8 167 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 OR52N4Q8NGI2 321 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 MR1Q95460 341 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 FAM71F1Q96KD3 344 aaPredicted RBP13.32□□□□□ -0.28
CACTIN-203ENST00000429344 CNTD2Q9H8S5 307 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 OR52A1Q9UKL2 312 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 SHISA8B8ZZ34 492 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 TXNL1O43396 289 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 AHSA1O95433 338 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 ASAH2BP0C7U1 165 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 TPT1P13693 172 aaKnown RBP13.32□□□□□ -0.28
CACTIN-203ENST00000429344 INSM1Q01101 510 aaPredicted RBP13.32□□□□□ -0.28
CACTIN-203ENST00000429344 GLO1Q04760 184 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 INPP5JQ15735 1006 aaPredicted RBP13.32□□□□□ -0.28
CACTIN-203ENST00000429344 SMOC1Q9H4F8 434 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 NIT2Q9NQR4 276 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 MRPL22Q9NWU5 206 aaKnown RBP13.32□□□□□ -0.28
CACTIN-203ENST00000429344 SYT7O43581 403 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 CD1AP06126 327 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 PSMB6P28072 239 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 ID4P47928 161 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 CEBPGP53567 150 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 B2MP61769 119 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 ASPHD2Q6ICH7 369 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 CLEC9AQ6UXN8 241 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 ETV3LQ6ZN32 361 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 MOB3CQ70IA8 216 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 PPP1R3BQ86XI6 285 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 MVB12AQ96EY5 273 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 JSRP1Q96MG2 331 aaPredicted RBP13.32□□□□□ -0.28
CACTIN-203ENST00000429344 UTP23Q9BRU9 249 aaKnown RBP13.32□□□□□ -0.28
CACTIN-203ENST00000429344 NICN1Q9BSH3 213 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 METTL7AQ9H8H3 244 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 GPR27Q9NS67 375 aa13.32□□□□□ -0.28
CACTIN-203ENST00000429344 TRBV11-1A0A0K0K1C0 115 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 MPTX1A8MV57 137 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 NPIPA5E9PKD4 350 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 POU3F1Q03052 451 aaPredicted RBP13.31□□□□□ -0.28
CACTIN-203ENST00000429344 SKP2Q13309 424 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 TRIM61Q5EBN2 209 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 OGFOD3Q6PK18 319 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 KLHL24Q6TFL4 600 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 SLC43A2Q8N370 569 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 OR4K15Q8NH41 348 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 NPIPA1Q9UND3 350 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 SNAPC5O75971 98 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 HCKP08631 526 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 CD80P33681 288 aa13.31□□□□□ -0.28
CACTIN-203ENST00000429344 OR3A2P47893 321 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms