RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 HEXA-AS1Q9H8Q6 139 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 PROK2Q9HC23 129 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 MYOZ1Q9NP98 299 aaPredicted RBP12.11□□□□□ -0.47
THBS3-202ENST00000428962 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 CACNA1HO95180 2353 aa12.11□□□□□ -0.47
THBS3-202ENST00000428962 TMEM82A0PJX8 343 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 TMEM235A6NFC5 223 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 PROB1E7EW31 1015 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 M0R233 179 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 RAB27BO00194 218 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 SLC22A5O76082 557 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 VSIG8P0DPA2 414 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 CTSSP25774 331 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 RAC1P63000 192 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 QRFPP83859 136 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 SGCAQ16586 387 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 MOGAT2Q3SYC2 334 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 ZNF260Q3ZCT1 412 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 FOXL2NBQ6ZUU3 175 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 GJC3Q8NFK1 279 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 OR2AK2Q8NG84 335 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 PRRT1Q99946 306 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 MYEF2Q9P2K5 600 aaKnown RBP12.1□□□□□ -0.47
THBS3-202ENST00000428962 KLK13Q9UKR3 277 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 FBXO4Q9UKT5 387 aa12.1□□□□□ -0.47
THBS3-202ENST00000428962 LAMA1P25391 3075 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 F5H5P2 479 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 ZIC3O60481 467 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 APOC1P02654 83 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 P04436 131 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 SP9P0CG40 484 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 TBPP20226 339 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 UNC119Q13432 240 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 CSRP2Q16527 193 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 FAM57BQ71RH2 274 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 TRAPPC6BQ86SZ2 158 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 FJX1Q86VR8 437 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 GALNT16Q8N428 558 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 BPIFB2Q8N4F0 458 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 CHST4Q8NCG5 386 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 OR9K2Q8NGE7 335 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 ZPBPQ9BS86 351 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 ZNF416Q9BWM5 594 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 POFUT1Q9H488 388 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 IFT46Q9NQC8 304 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 SLC2A8Q9NY64 477 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 UBQLN2Q9UHD9 624 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 TMEM14DPA8MWL7 114 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 H3BUI4 141 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 M0QYG6 137 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 TPD52L2O43399 206 aaKnown RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 STK17BO94768 372 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 CHRM2P08172 466 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 ZNF883P0CG24 379 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 UBBP0CG47 229 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 KLK2P20151 261 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 MPZP25189 248 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 SSTR2P30874 369 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 SRD5A2P31213 254 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 ZNF84P51523 738 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 CHAF1BQ13112 559 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 ZNF528Q3MIS6 628 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 RNASE10Q5GAN6 216 aaKnown RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 ANGPTL5Q86XS5 388 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 ZNF101Q8IZC7 436 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 MUC20Q8N307 709 aaPredicted RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 PAQR4Q8N4S7 273 aaPredicted RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 CCDC54Q8NEL0 328 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 KCNE4Q8WWG9 221 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 PGAM5Q96HS1 289 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 FAM71F1Q96KD3 344 aaPredicted RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 DPCDQ9BVM2 203 aaPredicted RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 SF3B5Q9BWJ5 86 aaKnown RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 TINAGL1Q9GZM7 467 aaPredicted RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 ZMAT3Q9HA38 289 aaKnown RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 OPN4Q9UHM6 478 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 PADI1Q9ULC6 663 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 PLEKHA6Q9Y2H5 1048 aa12.09□□□□□ -0.47
THBS3-202ENST00000428962 MRPS28Q9Y2Q9 187 aaKnown RBP12.09□□□□□ -0.47
THBS3-202ENST00000428962 PLSCR5A0PG75 271 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 G3V3Y1 287 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 L7N2F9 121 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 GOSR2O14653 212 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 DHHO43323 396 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 WDPCPO95876 746 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 HPP00738 406 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 FCER2P06734 321 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 HCKP08631 526 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 SLC2A1P11166 492 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 SUCLG1P53597 346 aaKnown RBP12.08□□□□□ -0.48
THBS3-202ENST00000428962 ARPC4P59998 168 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 GMFBP60983 142 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 GRK1Q15835 563 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 CDNFQ49AH0 187 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 C11orf88Q6PI97 169 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 PPP1R32Q7Z5V6 425 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 OR5AS1Q8N127 324 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 TMEM123Q8N131 208 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 OR8H3Q8N146 312 aa12.08□□□□□ -0.48
THBS3-202ENST00000428962 OR10R2Q8NGX6 335 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms