RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 FBXO34Q9NWN3 711 aa8.11□□□□□ -1.11
CTNND1-208ENST00000428599 H7BYZ3 331 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 SSSCA1O60232 199 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 HPP00738 406 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 PDGFBP01127 241 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 ALOX5APP20292 161 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 RFC3P40938 356 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 SPEM2Q0P670 501 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 ACKR1Q16570 336 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 TRMT12Q53H54 448 aaKnown RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 C19orf35Q6ZS72 473 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CDH26Q8IXH8 852 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 WDR31Q8NA23 367 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 TMEM56Q96MV1 263 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 RNF32Q9H0A6 362 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 LTB4R2Q9NPC1 389 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 GMPR2Q9P2T1 348 aaKnown RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 TRDV1A0A1B0GX56 115 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 RNASEK-C17orf49H0YIS7 233 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 GFYI3L273 518 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CTDSP2O14595 271 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 DSCR4P56555 118 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 HTRA4P83105 476 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 ENDOGQ14249 297 aaKnown RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 DTWD2Q8NBA8 298 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 C20orf27Q9GZN8 174 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 S1PR5Q9H228 398 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 TMPRSS5Q9H3S3 457 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 PSENENQ9NZ42 101 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 IGHV3-15A0A0B4J1V0 119 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 F5H697 171 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 RAF1P04049 648 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 NTF3P20783 257 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CCL7P80098 99 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 SMN1Q16637 294 aaKnown RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CGB2Q6NT52 195 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CRISPLD2Q9H0B8 497 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 ALPLP05186 524 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CBR1P16152 277 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 BMP5P22003 454 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 ARNTP27540 789 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 ID4P47928 161 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CCR9P51686 369 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 PNLIPRP2P54317 469 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CDK5Q00535 292 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 MICBQ29980 383 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 HLA-BQ31612 363 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 TMPRSS11FQ6ZWK6 438 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 LAX1Q8IWV1 398 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CA13Q8N1Q1 262 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 FAM103A1Q9BTL3 118 aaKnown RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 WDR61Q9GZS3 305 aaKnown RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CTDSP1Q9GZU7 261 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 GPR84Q9NQS5 396 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 RBFOX1Q9NWB1 397 aaKnown RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 KPTNQ9Y664 436 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 LY75O60449 1722 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 COL11A2P13942 1736 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 SULT1C4O75897 302 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 CTSLP07711 333 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 S100A11P31949 105 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 RHOBP62745 196 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 SPCS2Q15005 226 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 ELFN2Q5R3F8 820 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 ETFRF1Q6IPR1 90 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 Q6ZS52 159 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 C11orf42Q8N5U0 333 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 GPR32P1Q8NGA4 272 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 OR4F17Q8NGA8 305 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 APOBEC3DQ96AK3 386 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-208ENST00000428599 SLAMF8Q9P0V8 285 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 HDGFL3Q9Y3E1 203 aa8.1□□□□□ -1.11
CTNND1-208ENST00000428599 A0A0B4J203 849 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 PLPP1O14494 284 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 B3GALT4O96024 378 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 IAPPP10997 89 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 TRA2AQ13595 282 aaKnown RBP eCLIP8.09□□□□□ -1.11
CTNND1-208ENST00000428599 PCK2Q16822 640 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 C1orf53Q5VUE5 145 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 PRR27Q6MZM9 219 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 KCNRGQ8N5I3 272 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 ARIH2OSQ8N7S6 290 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 SIGLECL1Q8N7X8 197 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 BCL2L2Q92843 193 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-208ENST00000428599 ACY3Q96HD9 319 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 TMEM147Q9BVK8 224 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 NPAP1Q9NZP6 1156 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 SNX11Q9Y5W9 270 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 SMCHD1A6NHR9 2005 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 FRG2CA6NGY1 282 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 MS4A18H0YCH9 400 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 MT-CO3P00414 261 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 SCGB1C2P0DMR2 95 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 EPHA2P29317 976 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 ARRB2P32121 409 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 MS4A18Q3C1V0 323 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 TMEM268Q5VZI3 342 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 OR2Z1Q8NG97 314 aa8.09□□□□□ -1.11
CTNND1-208ENST00000428599 OR51S1Q8NGJ8 323 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms