RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 KRT72Q14CN4 511 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 OR8G1Q15617 311 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 SNAI3Q3KNW1 292 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 SLC36A3Q495N2 470 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 SMARCD3Q6STE5 483 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 ZNF826PQ6ZT77 177 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 SLC26A10Q8NG04 563 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 OR11L1Q8NGX0 322 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 OR2AE1Q8NHA4 323 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 Q8TCH9 128 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 SPRYD4Q8WW59 207 aaPredicted RBP13.71□□□□□ -0.21
VARS-216ENST00000428445 LHX4Q969G2 390 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 C7orf34Q96L11 122 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 CITED1Q99966 193 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 KCTD14Q9BQ13 255 aaPredicted RBP13.71□□□□□ -0.21
VARS-216ENST00000428445 RPRD1BQ9NQG5 326 aaKnown RBP13.71□□□□□ -0.21
VARS-216ENST00000428445 ADA2Q9NZK5 511 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 ABCD2Q9UBJ2 740 aa13.71□□□□□ -0.21
VARS-216ENST00000428445 SAMD4AQ9UPU9 718 aaKnown RBP13.71□□□□□ -0.21
VARS-216ENST00000428445 CLPSL1A2RUU4 121 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 ZNF879B4DU55 563 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 TNFRSF13BO14836 293 aaPredicted RBP13.7□□□□□ -0.22
VARS-216ENST00000428445 ARPC3O15145 178 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 ADAM20O43506 726 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 IDH3BO43837 385 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 GYPAP02724 150 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 PSKH1P11801 424 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 ARF6P62330 175 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 TRAP1Q12931 704 aaKnown RBP13.7□□□□□ -0.22
VARS-216ENST00000428445 OR8B8Q15620 311 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 GLYATQ6IB77 296 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 ASPHD2Q6ICH7 369 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 PGAP1Q75T13 922 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 C1QL4Q86Z23 238 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 CMTM5Q96DZ9 223 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 MAP6Q96JE9 813 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 DHRS1Q96LJ7 313 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 WDFY2Q96P53 400 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 ATF6BQ99941 703 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 NOX4Q9NPH5 578 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 DCAF13Q9NV06 445 aaKnown RBP13.7□□□□□ -0.22
VARS-216ENST00000428445 MRPL22Q9NWU5 206 aaKnown RBP13.7□□□□□ -0.22
VARS-216ENST00000428445 RNF7Q9UBF6 113 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 NOP16Q9Y3C1 178 aaKnown RBP13.7□□□□□ -0.22
VARS-216ENST00000428445 V9GYQ6 96 aa13.7□□□□□ -0.22
VARS-216ENST00000428445 IGHV3OR15-7A0A075B7D8 119 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 A0A0U1RQK1 487 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 A0A1B0GW55 424 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 OR6C68A6NDL8 312 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 HLA-DQA2P01906 255 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 GRPP07492 148 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 DUX4L2P0CJ85 424 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 DUX4L3P0CJ86 424 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 DUX4L4P0CJ87 422 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 DUX4L5P0CJ88 424 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 DUX4L6P0CJ89 424 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 DUX4L7P0CJ90 424 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 GGT2P36268 569 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 ZNF92Q03936 586 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 RFX4Q33E94 735 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 ZNF362Q5T0B9 420 aaPredicted RBP13.69□□□□□ -0.22
VARS-216ENST00000428445 SLC35F1Q5T1Q4 408 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 DUX4L9Q6RFH8 374 aaPredicted RBP13.69□□□□□ -0.22
VARS-216ENST00000428445 LYPD4Q6UWN0 246 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 LNX2Q8N448 690 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 SDR9C7Q8NEX9 313 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 OR2AJ1Q8NGZ0 328 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 ZNRF4Q8WWF5 429 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 RBM4BQ9BQ04 359 aaKnown RBP13.69□□□□□ -0.22
VARS-216ENST00000428445 FUZQ9BT04 418 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 SLC22A4Q9H015 551 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 OR52D1Q9H346 318 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 GORASP2Q9H8Y8 452 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 ERVK-18Q9QC07 812 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 DUX4Q9UBX2 424 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 CYB5R1Q9UHQ9 305 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 RNF114Q9Y508 228 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 N6AMT1Q9Y5N5 214 aa13.69□□□□□ -0.22
VARS-216ENST00000428445 A0A1B0GUS0 222 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 CD300LBA8K4G0 201 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 LGALS8O00214 317 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 P2RY10O00398 339 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 NDUFA7O95182 113 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 RENP00797 406 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 PYCR1P32322 319 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 DLX1P56177 255 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 MALLQ13021 153 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 ZNF620Q6ZNG0 422 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 MRPL21Q7Z2W9 205 aaKnown RBP13.68□□□□□ -0.22
VARS-216ENST00000428445 ZBTB46Q86UZ6 589 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 PLPP7Q8NBV4 271 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 LINC01006Q8NI28 216 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 FANK1Q8TC84 345 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 GATAD2BQ8WXI9 593 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 FAM71F1Q96KD3 344 aaPredicted RBP13.68□□□□□ -0.22
VARS-216ENST00000428445 PKP2Q99959 881 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 ADAT1Q9BUB4 502 aaKnown RBP13.68□□□□□ -0.22
VARS-216ENST00000428445 IFT27Q9BW83 186 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 NSRP1Q9H0G5 558 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms