RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 OR10D3Q8NH80 312 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 OR14L1PQ8NHC6 308 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 RNF128Q8TEB7 428 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 APH1BQ8WW43 257 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 TRUB1Q8WWH5 349 aaKnown RBP4.72□□□□□ -1.65
C9orf3-205ENST00000427193 TAF15Q92804 592 aaKnown RBP eCLIP4.72□□□□□ -1.65
C9orf3-205ENST00000427193 OSTF1Q92882 214 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 PTP4A1Q93096 173 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 ABTB1Q969K4 478 aaPredicted RBP4.72□□□□□ -1.65
C9orf3-205ENST00000427193 JSRP1Q96MG2 331 aaPredicted RBP4.72□□□□□ -1.65
C9orf3-205ENST00000427193 MUS81Q96NY9 551 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 MYCBPQ99417 103 aaPredicted RBP4.72□□□□□ -1.65
C9orf3-205ENST00000427193 DEFB127Q9H1M4 99 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 VCX3BQ9H321 246 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 EGLN3Q9H6Z9 239 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 TMEM185BQ9H7F4 350 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 NANSQ9NR45 359 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 CMC2Q9NRP2 79 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 KRT84Q9NSB2 600 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 PAQR5Q9NXK6 330 aaPredicted RBP4.72□□□□□ -1.65
C9orf3-205ENST00000427193 ZNF226Q9NYT6 803 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 UBAP1Q9NZ09 502 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 ENOPH1Q9UHY7 261 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 PCDHGB5Q9Y5G0 923 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 FAM215AQ9Y5M1 114 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 GTF3C1Q12789 2109 aa4.72□□□□□ -1.65
C9orf3-205ENST00000427193 A0A1B0GTH9 108 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 ZNF724A8MTY0 619 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CENPBD1B2RD01 187 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 NPIPA5E9PKD4 350 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 J3QRE1 110 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TNFSF11O14788 317 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TFECO14948 347 aaPredicted RBP4.71□□□□□ -1.66
C9orf3-205ENST00000427193 SURF4O15260 269 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 AHCYL1O43865 530 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CXCL13O43927 109 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 PRKYO43930 277 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TRAPPC6AO75865 159 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 AQP8O94778 261 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TOXO94900 526 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 AKR7A3O95154 331 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 SOX14O95416 240 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TGM6O95932 706 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 OPN1LWP04000 364 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CCNA2P20248 432 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 PTNP21246 168 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 SLC2A5P22732 501 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 SFTPDP35247 375 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CDKN1AP38936 164 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 SLC15A1P46059 708 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CARD18P57730 90 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CXCR4P61073 352 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CSNK2A1P68400 391 aaPredicted RBP4.71□□□□□ -1.66
C9orf3-205ENST00000427193 PLGLB1Q02325 96 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 RUNX1T1Q06455 604 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 BLMHQ13867 455 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 GINS1Q14691 196 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TAF11Q15544 211 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 OR7A5Q15622 319 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 ACKR1Q16570 336 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 PGGHGQ32M88 737 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 ACSF3Q4G176 576 aaPredicted RBP4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CCDC92Q53HC0 331 aaPredicted RBP4.71□□□□□ -1.66
C9orf3-205ENST00000427193 MESTQ5EB52 335 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 C6orf52Q5T4I8 152 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 WLSQ5T9L3 541 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 LINC01590Q5TEZ4 76 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TTC23Q5W5X9 447 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 HBMQ6B0K9 141 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 SLC27A4Q6P1M0 643 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 RRM2BQ7LG56 351 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 GALNT5Q7Z7M9 940 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 ENTHD1Q8IYW4 607 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CDK20Q8IZL9 346 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 DHRSXQ8N5I4 330 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 ARIH2OSQ8N7S6 290 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 OR2T33Q8NG76 320 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 OR8J1Q8NGP2 316 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 OR51A7Q8NH64 312 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 FANK1Q8TC84 345 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CPNE4Q96A23 557 aaPredicted RBP4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TMEM45BQ96B21 275 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 SDCCAG3Q96C92 435 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 RNFT2Q96EX2 444 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 SAMD8Q96LT4 415 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 OXGR1Q96P68 337 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TSPAN32Q96QS1 320 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 OR5B2Q96R09 309 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 SMR3AQ99954 134 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TSSK6Q9BXA6 273 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 C1QTNF5Q9BXJ0 243 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 TXNIPQ9H3M7 391 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 FN3KQ9H479 309 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CALHM2Q9HA72 323 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 CYSLTR2Q9NS75 346 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 ZFP57Q9NU63 452 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 FKBP14Q9NWM8 211 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 IL20RAQ9UHF4 553 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 NPIPA1Q9UND3 350 aa4.71□□□□□ -1.66
C9orf3-205ENST00000427193 BAIAP2Q9UQB8 552 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms